LOCUS BC084544 1814 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens nuclear receptor subfamily 2, group F, member 6, mRNA
(cDNA clone MGC:99546 IMAGE:4591955), complete cds.
ACCESSION BC084544
VERSION BC084544.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1814)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1814)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46411186.
FEATURES Location/Qualifiers
source 1..1814
/db_xref="H-InvDB:HIT000266053"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99546 IMAGE:4591955"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1814
/gene="NR2F6"
/gene_synonym="EAR-2"
/gene_synonym="EAR2"
/db_xref="GeneID:2063"
/db_xref="HGNC:HGNC:7977"
/db_xref="MIM:132880"
CDS 99..1313
/gene="NR2F6"
/gene_synonym="EAR-2"
/gene_synonym="EAR2"
/codon_start=1
/product="nuclear receptor subfamily 2, group F, member 6"
/protein_id="AAH84544.2"
/db_xref="GeneID:2063"
/db_xref="HGNC:HGNC:7977"
/db_xref="MIM:132880"
/translation="MAMVTGGWGGPGGDTNGVDKAGGYPRAAEDDSASPPGAASDAEP
GDEERPGLQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQ
HHRNQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGAVAASSGSPPGSALAAVASGGDL
FPGQPVSELIAQLLRAEPYPAAAGRFGAGGGAAGAVLGIDNVCELAARLLFSTVEWAR
HAPFFPELPVADQVALLRLSWSELFVLNAAQAALPLHTAPLLAAAGLHAAPMAAERAV
AFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQVA
LTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDMLLS
GSTFNWPYGSGQ"
BASE COUNT 314 a 594 c 612 g 294 t
ORIGIN
1 cggggccgaa tgcgcgccgc gtagggtccc ccgggccgag aggggtgccc ggagggaaga
61 gcgcggtggg ggcgccccgg ccccgctgcc ctggggctat ggccatggtg accggcggct
121 ggggcggccc cggcggcgac acgaacggcg tggacaaggc gggcggctac ccgcgcgcgg
181 ccgaggacga ctcggcctcg ccccccggtg ccgccagcga cgccgagccg ggcgacgagg
241 agcggccggg gctgcaggtg gactgcgtgg tgtgcgggga caagtcgagc ggcaagcatt
301 acggtgtctt cacctgcgag ggctgcaaga gctttttcaa gcgaagcatc cgccgcaacc
361 tcagctacac ctgccggtcc aaccgtgact gccagatcga ccagcaccac cggaaccagt
421 gccagtactg ccgtctcaag aagtgcttcc gggtgggcat gaggaaggag gcggtgcagc
481 gcggccgcat cccgcactcg ctgcctggtg ccgtggccgc ctcctcgggc agccccccgg
541 gctcggcgct ggcggcagtg gcgagcggcg gagacctctt cccggggcag ccggtgtccg
601 aactgatcgc gcagctgctg cgcgctgagc cctaccctgc ggcggccgga cgcttcggcg
661 cagggggcgg cgcggcgggc gcggtgctgg gcatcgacaa cgtgtgcgag ctggcggcgc
721 ggctgctctt cagcaccgtg gagtgggcgc gccacgcgcc cttcttcccc gagctgccgg
781 tggccgacca ggtggcgctg ctgcgcctga gctggagcga gctcttcgtg ctgaacgcgg
841 cgcaggcggc gctgcccctg cacacggcgc cgctactggc cgccgccggc ctccacgccg
901 cgcctatggc cgccgagcgc gccgtggctt tcatggacca ggtgcgcgcc ttccaggagc
961 aggtggacaa gctgggccgc ctgcaggtcg actcggccga gtatggctgc ctcaaggcca
1021 tcgcgctctt cacgcccgac gcctgtggcc tctcagaccc ggcccacgtt gagagcctgc
1081 aggagaaggc gcaggtggcc ctcaccgagt atgtgcgggc gcagtacccg tcccagcccc
1141 agcgcttcgg gcgcctgctg ctgcggctcc ccgccctgcg cgcggtccct gcctccctca
1201 tctcccagct gttcttcatg cgcctggtgg ggaagacgcc cattgagaca ctgatcagag
1261 acatgctgct gtcggggagt accttcaact ggccctacgg ctcgggccag tgaccatgac
1321 ggggccacgt gtgctgtggc caggcctgca gacagacctc aagggacagg gaatgctgag
1381 gcctcgaggg gcctcccggg gcccaggact ctggcttctc tcctcagact tctatttttt
1441 aaagactgtg aaatgtttgt cttttctgtt ttttaaatga tcatgaaacc aaaaagagac
1501 tgatcatcca ggcctcagcc tcatcctccc caggacccct gtccaggatg gagggtccaa
1561 tcctaggaca gccttgttcc tcagcacccc tagcatgaac ttgtgggatg gtggggttgg
1621 cttccctggc atgatggaca aaggcctggc gtcggccaga ggggctgctc cagtgggcag
1681 gggtagctag cgtgtgccag gcagatcctc tggacacgta acctatgtca gacactacat
1741 gatgactcaa ggccaataat aaagacattt cctacctgca aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaa
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