LOCUS BC083877 1927 bp mRNA linear ROD 15-JUL-2006
DEFINITION Rattus norvegicus acyl-Coenzyme A binding domain containing 3, mRNA
(cDNA clone MGC:95164 IMAGE:7130229), complete cds.
ACCESSION BC083877
VERSION BC083877.1
KEYWORDS MGC.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 1927)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1927)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Howard Jacobs
cDNA Library Preparation: Express Genomics
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 184 Row: h Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33469058.
FEATURES Location/Qualifiers
source 1..1927
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="MGC:95164 IMAGE:7130229"
/tissue_type="Kidney, rat (Brown Norway)"
/clone_lib="NIH_MGC_236"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene 1..1927
/gene="Acbd3"
/db_xref="GeneID:289312"
/db_xref="RGD:727851"
CDS 20..1600
/gene="Acbd3"
/codon_start=1
/product="acyl-Coenzyme A binding domain containing 3"
/protein_id="AAH83877.1"
/db_xref="GeneID:289312"
/db_xref="RGD:727851"
/translation="MAAQLNVEQLEVSLDGLTLSPDSEERPGAEGAPLQTPPSSPPGD
GLGSGTAGQQREPGEAAAEGAAEEARRMEQHWGFGLEELYGLALRFYKIKDGKAFHPT
YEEKLKFVALHKQVLLGPYNPDTSPEVGFFDVLGNDRRREWAALGNMSKEDAMVEFVK
LLNKCCPLLSAYVASHRIEKEEEEKRRKAEEERRQREEEERERLQKEEEKRKRGEEDR
LRREEEERRRIEEERLRLEQQKQQIMAALNSQTAVQFQQYAAQQYPGNYEQQQILIRQ
LQEQHYQQYMQQLYQVQLAQQQAALQKQQEVVVAGASLPASAKVNTAGAGDPLPVNGQ
AKTHTENPEKVLEPEAAEEALENGPKDSLPVIAAPSMWTRPQIKDFKEKIRQDADSVI
TVRRGEVVTVRVPTHEEGSYLFWEFATDSYDIGFGVYFEWTDSPNAAVSVHVSESSDD
EEEEEEENVTCEEKAKKNVNKPLLDEIVPVYRRDCHEEVYAGSHQYPGRGVYLLKFDN
SYSLWRSKSVYYRVYYTR"
BASE COUNT 543 a 423 c 580 g 381 t
ORIGIN
1 ggaggcgctg cgagcggaga tggcggcgca gctgaacgta gagcaacttg aggtgtcgct
61 cgacggcctc acgctgagcc cggattcaga ggagcggccc ggcgcggagg gtgccccgct
121 gcagacgccg ccgtcctcgc cccccgggga tggactgggc tccggcacag cgggacagca
181 gcgggagccc ggggaggcgg cggctgaggg cgcggccgag gaggcgcggc ggatggagca
241 gcactggggc tttggcctgg aggagctata cgggctggcg ctgcgcttct acaaaataaa
301 agatggcaaa gccttccatc caacttacga agaaaaactg aagtttgtgg cactgcataa
361 gcaagttctt ttgggcccat ataacccaga cacttcccct gaggttggat tctttgatgt
421 gttggggaat gataggagga gagaatgggc agctctggga aacatgtcca aagaggacgc
481 catggtagag tttgtgaagc ttctgaataa gtgctgtcct ctcctctcag catatgttgc
541 gtcccacaga atagagaagg aagaagaaga aaaaagaaga aaggcggagg aggagcgaag
601 gcagcgtgaa gaagaagaac gagagcggct gcaaaaggaa gaagagaaac ggaagcgagg
661 ggaggaggac cgactcagac gggaggaaga agagaggcgg cggatagaag aagagaggct
721 tcggctggaa cagcaaaagc agcagataat ggcagcttta aactcgcaga ctgccgtgca
781 attccagcag tatgcggccc agcagtatcc agggaactac gagcagcagc agattctcat
841 ccgccagctg caggagcagc actatcagca gtacatgcaa cagttatacc aagtccagct
901 tgcacagcaa caggcagcat tgcagaagca gcaagaagta gtggtggctg gggcttcatt
961 gcctgcgtca gcaaaggtga acacagctgg agcaggtgat cccctgccag tgaacggaca
1021 ggccaagacc cacactgaga atcccgagaa agtccttgag ccagaagctg cggaagaggc
1081 cttggaaaat ggacccaaag actctcttcc agtgattgca gctccttcca tgtggacaag
1141 accacagatc aaagacttta aagagaagat tcggcaggat gcagattctg tgattacagt
1201 ccggcgagga gaagtagtca ccgttcgagt ccccactcat gaggaaggat catacctctt
1261 ttgggaattt gccacagaca gttatgacat tgggtttggg gtttattttg aatggacaga
1321 ctctccaaac gctgctgtca gtgtgcatgt cagtgagtcc agtgacgacg aagaggagga
1381 ggaagaagaa aatgtcactt gtgaagagaa agccaaaaag aatgtcaaca agcctctgct
1441 ggatgagatt gtacctgtgt accggcggga ctgtcatgag gaagtgtatg caggcagcca
1501 ccagtaccca gggagggggg tctatctcct caagtttgat aactcctact ctctgtggag
1561 gtctaagtca gtctactaca gagtctatta tactagataa agctggtgtt acagagtcgg
1621 agtctggggt tgagcagaag atgacattta atttcctttg acttttgtgg cgcataggag
1681 tcagtgttta ccttctcgat tgtgttctga tggtttatga actcttactg agaaccagga
1741 ttccttgaga ctcgttagcg ttaatgctct gatgttaaaa gcagttctga agactcatct
1801 agcccttggg tgctgaccag cagagccgct cgtggatatt ggagttacaa gagctacgtg
1861 ttaatattca gtctccaaaa taaacatccc ggcgttgccc tgaaaaaaaa aaaaaaaaaa
1921 aaaaaaa
//