LOCUS BC083513 6434 bp mRNA linear HUM 12-OCT-2004
DEFINITION Homo sapiens zinc finger protein 638, mRNA (cDNA clone MGC:90196
IMAGE:5540321), complete cds.
ACCESSION BC083513
VERSION BC083513.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6434)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6434)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21626467.
FEATURES Location/Qualifiers
source 1..6434
/db_xref="H-InvDB:HIT000266043"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90196 IMAGE:5540321"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..6434
/gene="ZNF638"
/gene_synonym="MGC26130"
/gene_synonym="NP220"
/gene_synonym="ZFML"
/db_xref="GeneID:27332"
CDS 283..6156
/gene="ZNF638"
/gene_synonym="MGC26130"
/gene_synonym="NP220"
/gene_synonym="ZFML"
/codon_start=1
/product="ZNF638 protein"
/protein_id="AAH83513.1"
/db_xref="GeneID:27332"
/translation="MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYP
AGRARGIPHRFAGHESYQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGS
RWDDEPHISASVAVKQSSVTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRY
PDEQLTPENMPLILRDIRMRKMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYG
YTEDPLEVRIYDPEIPTDEVENEFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPG
ESSNNRSFFSVESGTKMSGLHISGGQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQ
QPFSSELISSVSQQERIPHEPVINSSNVHVGSRGSKKNYQSQADIPIRSPFGIVKASW
LPKFSHADAQKMKRLPTPSMMNDYYAASPRIFPHLCSLCNVECSHLKDWIQHQNTSTH
IESCRQLRQQYPDWNPEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRS
RSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSR
RSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTS
ATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGSVLLITE
LPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLTIK
GKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVEIVTSTSAAKTGQA
KASVAKVNKSTGKSASSVKSVVTVAVKGNKASIKTAKSGGKKSLEAKKTGNVKNKDSN
KPVTIPENSEIKTSIEVKATENCAKEAISDAALEATENEPLNKETEEMCVMLVSNLPN
KGYSVEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMVKFYTCFPVLMDGNQL
SISMAPENMNIKDEEAIFITLVKENDPEANIDTIYDRFVHLDNLPEDGLQCVLCVGLQ
FGKVDHHVFISNRNKAILQLDSPESAQSMYSFLKQNPQNIGDHMLTCSLSPKIDLPEV
QIEHDPELEKESPGLKNSPIDESEVQTATDSPSVKPNELEEESTPSIQTETLVQQEEP
CEEEAEKATCDSDFAVETLELETQGEEVKEEIPLVASASVSIEQFTENAEECALNQQM
FNSDLEKKGAEIINPKTALLPSDSVFAEERNLKGILEESPSEAEDFISGITQTMVEAV
AEVEKNETVSEILPSTCIVTLVPGIPTGDEKTVDKKNISEKKGNMDEKEEKEFNTKET
RMDLQIGTEKAEKNEGRMDAEKVEKMAAMKEKPAENTLFKAYPNKGVGQANKPDETSK
TSILAVSDVSSSKPSIKAVIVSSPKAKATVSKTENQKSFPKSVPRDQINAEKKLSAKE
FGLLKPTSARSGLAESSSKFKPTQSSLTRGGSGRISALQGKLSKLDYRDITKQSQETE
ARPSIMKRDDSNNKTLAEQNTKNPKSTTGRSSKSKEEPLFPFNLDEFVTVDEVIEEVN
PSQAKQNPLKGKRKETLKNVPFSELNLKKKKGKTSTPRGVEGELSFVTLDEIGEEEDA
AAHLAQALVTVDEVIDEEELNMEEMVKNSNSLFTLDELIDQDDCISHSEPKDVTVLSV
AEEQDLLKQERLVTVDEIGEVEELPLNESADITFATLNTKGNEGDTVRDSIGFISSQV
PEDPSTLVTVDEIQDDSSDLHLVTLDEVTEEDEDSLADFNNLKEELNFVTVDEVGEEE
DGDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQVGPVNENVMEEDLKTM
IERHLTAKTPTKRVRIGKTLPSEKAVVTEPAKGEEAFQMSEVDEESGLKDSEPERKRK
KTEDSSSGKSVASDVPEGEKAMTNHCKSTRHKQNTEKFMAKQRKEKEQNEAEERSSR"
BASE COUNT 2278 a 1143 c 1391 g 1622 t
ORIGIN
1 tttcggcgtc gagactggag gctgagtgct aaactgtgtg gggcgcggat gggatccagc
61 tgttagtcgg gtaggcatag ctttgtgtta ttcttggaaa atttcgcacc acttgtgaat
121 tccttgaacc tgggcattgc aaacccactt ctgttgggcc catctccttt gcactttgct
181 cagattaaga ctcagttggc gcttcagcag ctgaatgccg ttgcctcaca tggttcaaca
241 ccaccttata ctttattaaa tcaggctttc ttgaaaatag ccatgtcgag acccaggttt
301 aatcctcgag gagactttcc acttcaaagg ccacgagcac ctaacccttc tgggatgagg
361 cctccaggac catttatgag gcctggatct atgggtctcc caagatttta cccagcaggg
421 agagcacgtg gaattccaca cagatttgct ggccatgaat cttatcagaa catggggcca
481 cagagaatga atgttcaggt aactcaacac agaactgatc caagattgac caaagaaaaa
541 ctggattttc atgaagcaca acagaagaag gggaagcctc atggtagccg gtgggatgat
601 gagcctcata tatctgcatc agtggcagtg aaacagagtt ctgtaacaca ggttacagag
661 cagagtccca aagtacagag ccgctataca aaagagagtg cctcaagtat cttagcaagt
721 tttggattat ctaatgaaga cctagaagaa cttagtcgct atcctgatga acaactaact
781 cctgaaaata tgccattaat tttgagggat ataagaatgc gaaaaatggg gcgccgatta
841 cctaatttac cttctcagag cagaaataaa gaaacacttg gtagtgaagc agtttcaagt
901 aatgtgatcg attatgggca tgcaagcaaa tatggctaca cagaagatcc acttgaagta
961 cgtatttatg atcctgaaat tccaactgat gaggtcgaga atgaatttca gtcacagcag
1021 aacatttctg catctgttcc caatccaaat gtgatatgta attctatgtt tcctgttgaa
1081 gacgtatttc gccaaatgga cttccccggt gagtcctcca ataatcggtc ctttttctca
1141 gttgagagtg gaaccaagat gtcaggctta cacatttcag gaggacagtc agtccttgaa
1201 cccataaaat ccgtcaacca atccattaac caaacagtta gccagacaat gagtcaatct
1261 ctgattcctc catctatgaa ccagcaacct ttttcgtcgg aattaatttc atctgtaagc
1321 cagcaagagc ggatcccaca tgaacctgtg attaattcat ctaacgtaca tgttggatca
1381 agaggaagta aaaagaatta ccagtcacag gctgacattc ccattcggtc tccctttggt
1441 attgtgaaag catcctggct accaaagttt tcacatgctg atgcccagaa gatgaagaga
1501 cttccaactc cttctatgat gaatgattat tatgcagcat ctccaagaat atttccacat
1561 ttgtgttctc tgtgtaacgt agaatgtagt catttgaagg attggattca gcatcaaaat
1621 acatctactc atattgagag ctgtcgacag ttacgtcaac agtatcctga ttggaatcct
1681 gagatcctcc catcgagaag aaatgagggc aatagaaaag aaaatgaaac tccacgaaga
1741 cgttctcatt cccccagtcc taggcgttct agaagatcaa gctcaagtca cagattccgt
1801 cggtctcgaa gcccaatgca ttacatgtat aggccgagaa gtcgaagtcc aagaatttgc
1861 catcgtttca tttctagata cagatccaga tccagatccc gttcaccata tcgaattaga
1921 aatccattta gaggtagtcc aaaatgcttt cgatcagtta gccctgagag gatgtcaagg
1981 agatcagtga gatcatcaga tagaaaaaaa gcattagaag atgtagtaca acgatctggg
2041 catgggacag aatttaataa acagaagcat cttgaagctg ctgataaggg acattcacca
2101 gcacaaaagc ctaaaactag cagtggaaca aaaccatcag ttaaacctac aagcgctaca
2161 aagagtgatt caaatctagg aggacattct attcgttgta aatcaaagaa tcttgaagat
2221 gacactttgt cagaatgtaa acaggtgtct gataaagctg tttctctcca gcgaaagctt
2281 cggaaagaac agtcattgca ttatggttcg gttcttctta taactgaatt accagaggat
2341 ggttgtactg aagaagatgt gagaaaatta tttcaaccat ttgggaaagt gaatgatgtc
2401 ctaattgttc catatagaaa agaggcttac ctagaaatgg aatttaaaga ggcaattact
2461 gcaattatga agtacattga aacaacacct cttacgataa aaggaaaaag tgtgaaaata
2521 tgtgttccag gaaagaaaaa agcacagaac aaagaggtga agaaaaagac tttagagtca
2581 aagaaagtat ctgcatctac cttaaaaaga gatgcagatg cttcaaaagc tgttgaaatt
2641 gttacttcaa cttctgctgc caaaactgga caagccaagg catctgtagc caaagtaaac
2701 aaatctacag ggaaatcagc aagttctgta aaatctgtgg taacggtagc tgttaaaggt
2761 aataaagctt caatcaaaac agcaaaatct ggtggaaaga agtctctaga agccaaaaag
2821 actgggaatg tcaaaaacaa agactctaac aaacctgtga ctataccaga aaactctgaa
2881 ataaagacca gtattgaagt caaagccact gaaaactgtg ctaaagaagc tatttctgat
2941 gctgctttgg aggccacaga gaatgaacca cttaacaagg aaacagaaga aatgtgtgtg
3001 atgcttgtct ctaatttgcc taataaagga tattctgtag aagaagttta tgacttagca
3061 aaaccatttg gtggtttaaa ggatatcttg attttatcat ctcataaaaa ggcatatata
3121 gaaataaata gaaaagctgc tgagtctatg gtaaaatttt atacctgctt cccagtattg
3181 atggatggaa atcaactctc aataagtatg gctcctgaaa acatgaatat aaaagatgag
3241 gaagctatat ttataacctt ggtaaaagaa aatgacccag aggcaaacat agatacaatc
3301 tatgatcgat ttgtacatct tgataattta ccggaagatg gacttcagtg tgtactttgt
3361 gttggacttc agtttggaaa agtggatcac catgtattca taagtaatag aaataaggca
3421 attcttcagt tagatagtcc tgaatctgct cagtcaatgt atagctttct gaaacaaaat
3481 ccacaaaata ttggtgacca tatgttgacc tgctcattat ctccaaagat agacttacca
3541 gaggtgcaaa ttgagcatga cccagaatta gaaaaagaaa gccctggctt gaaaaacagt
3601 ccaattgatg aaagtgaggt gcaaacagca actgatagtc cctctgttaa acctaatgag
3661 cttgaagaag aaagtactcc cagcattcaa acagaaactt tggtacagca ggaagagcct
3721 tgtgaggaag aagctgaaaa agcaacatgt gattctgact ttgctgttga aactttggag
3781 cttgaaactc aaggagagga ggtcaaagaa gaaattcctc ttgtagcatc cgcttcagtc
3841 agtattgaac aattcactga aaatgccgag gagtgtgctt taaatcagca gatgtttaac
3901 agtgacttgg agaagaaagg ggcagaaatt attaacccta aaacagcatt gttaccatct
3961 gacagtgtgt ttgcagaaga aaggaacctc aaaggaattc tagaagaatc tccatctgaa
4021 gcagaagatt tcatttctgg aattacacag actatggtag aagctgtagc tgaagtagaa
4081 aaaaatgaaa ctgtttcgga aatattgcca tcaacttgta ttgtgacgtt agtaccagga
4141 attcccactg gggatgagaa gacagtggac aaaaagaata tttctgaaaa aaaaggtaac
4201 atggatgaaa aggaggagaa ggaatttaat actaaggaaa ccagaatgga tcttcaaata
4261 ggaacagaga aggctgaaaa gaatgaaggt aggatggatg cagaaaaggt ggaaaagatg
4321 gcagcaatga aagaaaagcc tgcagaaaac actttattca aggcataccc aaataaagga
4381 gtgggtcagg ctaataagcc tgatgaaact agtaaaacta gtattctggc tgtatcagat
4441 gtatctagca gtaaaccaag catcaaggct gttatagtct cttctcctaa ggcaaaagct
4501 acagtttcaa aaactgaaaa tcagaaaagt tttccaaaat ctgtgcccag agatcaaata
4561 aatgctgaaa agaaactttc agccaaggaa tttggtctgc ttaaacccac aagtgccagg
4621 tcaggcttgg cagaaagcag cagtaaattc aaacctactc agagcagtct taccagagga
4681 ggcagtggaa ggatctcagc cctgcaaggc aagctttcta aactggatta cagagatata
4741 acaaaacaat ctcaggaaac agaggctaga ccttccatca tgaaacggga tgacagcaac
4801 aataagactt tggctgagca aaacactaag aatcctaaaa gcactactgg tagaagttcc
4861 aaatctaaag aggagccatt atttccattt aatttggatg aatttgttac tgtggatgag
4921 gttatagaag aagtgaatcc ttctcaggcc aagcagaatc cactaaaggg aaaaaggaaa
4981 gaaactctca aaaatgttcc tttctctgaa cttaacttaa agaagaaaaa ggggaaaact
5041 tccactcctc gtggtgttga gggagaacta tcttttgtga cattggatga gattggggaa
5101 gaggaagatg cagctgcaca tctagcacaa gctctagtca ctgtggatga agtaattgat
5161 gaagaagaac taaatatgga agaaatggta aaaaattcaa attcactttt tacattagat
5221 gaattaattg accaagatga ttgcatttcc cacagtgaac ctaaagatgt tactgttctg
5281 tcagtggctg aagaacaaga tctcctcaaa caggaacgct tggtaactgt ggatgaaatt
5341 ggagaagtgg aagagctacc tttgaatgag tcagcagaca taacttttgc cactttaaat
5401 actaaaggaa atgaaggaga tactgtaagg gattccattg gcttcatttc ttctcaggtg
5461 cccgaagacc cttctacttt agttactgta gatgaaatac aagatgacag cagtgatttg
5521 catttagtga ctttggatga agtaactgaa gaggatgaag actctctggc ggattttaac
5581 aaccttaaag aagagcttaa ttttgttact gttgatgaag ttggagagga ggaagatgga
5641 gataatgatt taaaagttga gttagcacaa agcaaaaatg accatcccac agataaaaaa
5701 gggaatagaa agaagagagc tgtggacaca aaaaagacaa aacttgaatc cttgtcccaa
5761 gtgggtccag taaatgagaa tgttatggaa gaagatctaa aaaccatgat tgaaagacac
5821 ttaacagcta aaactccaac caagagagtt agaattggga aaactctgcc atcagaaaaa
5881 gctgttgtga cagaaccagc aaaaggtgaa gaggccttcc agatgagtga agttgatgag
5941 gaatctggat taaaggattc agaaccagag cgaaaacgca agaagactga agactcttct
6001 tcaggcaaat cagtggcgtc tgatgtccct gagggtgaaa aagcaatgac aaatcactgc
6061 aagagtacac gtcataagca aaatactgag aaattcatgg ccaagcaaag aaaggaaaag
6121 gagcagaatg aggctgaaga aagaagctct aggtgattgg gggaaaggaa agaattcact
6181 agaaatttgt ttagggtcca gttgatttgt gtatttttgt tatcatttaa tttgtaattt
6241 tcgtttcaga agcaaatatt cgtgttgtac aaatttctga ttgccctaaa tgtagagaga
6301 ctgatgggga aagtatgatg ggtttgattt ttatatcaaa tcatcaggca tggagaaata
6361 tcttttagaa gtgttaaaat aaatgttcct actgtatatt taaaatacaa aaaaaaaaaa
6421 aaaaaaaaaa aaaa
//