LOCUS BC083353 1039 bp mRNA linear ROD 15-JUL-2006 DEFINITION Mus musculus H3 histone, family 3A, mRNA (cDNA clone MGC:102150 IMAGE:5714859), complete cds. ACCESSION BC083353 VERSION BC083353.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1039) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1039) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Jim Lin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 195 Row: c Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31982294. FEATURES Location/Qualifiers source 1..1039 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /clone="MGC:102150 IMAGE:5714859" /tissue_type="Mouse, brain 12.5 dpc" /clone_lib="NIH_BMAP_FB0" /lab_host="DH10B" /note="Vector: pYX-ASC" gene 1..1039 /gene="H3f3a" /gene_synonym="H3.3A" /db_xref="GeneID:15078" /db_xref="MGI:MGI:1097686" CDS 97..507 /gene="H3f3a" /gene_synonym="H3.3A" /codon_start=1 /product="H3 histone, family 3A" /protein_id="AAH83353.1" /db_xref="GeneID:15078" /db_xref="MGI:MGI:1097686" /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" BASE COUNT 305 a 225 c 217 g 292 t ORIGIN 1 cgccgcgccg ctgccgctct ccaacgccag cgccgcctct cgcttgccga gctccagccg 61 aaggagaagg ggggtaagta aggaggtgtc cttaccatgg ctcgtacaaa gcagactgcc 121 cgcaaatcca ccggtggtaa agcacccagg aaacaactgg ctacaaaagc cgctcgcaag 181 agtgcgccct ctactggagg ggtgaagaaa cctcatcgtt acaggcctgg tactgtggcc 241 ctccgtgaaa tcagacgcta tcagaagtcc actgaacttc tgatccgcaa gctccccttt 301 cagcgtctgg tgcgagaaat tgctcaggac ttcaaaacag atctgcgctt ccagagtgca 361 gctattggtg ctttgcagga ggcaagtgag gcctatctgg ttggcctttt tgaagatacc 421 aatctgtgtg ctatccatgc caaacgtgta acaattatgc caaaagatat ccagctagca 481 cgccgcatac gcggagaacg tgcttaagag tccactatga ggggaaacat ttcattctca 541 aaaaaatttt ttttcctctt cttcctgtta tcagtagttc tgaatgttag atattttttc 601 catggggtca aaggtaccta agtatatgat tgcgagtgga aacatagggg acagaatcag 661 gtattggcgt ttctccacgt tcatttgtgt gtgaattttt aatataaatg caagatggaa 721 agcattaatg caagcaaaat gtttcagtga acacatttca acagttcaac tttataacaa 781 ttataaataa acctgttaaa attttctgga caatgccagc atttggattt ttttaaaata 841 agtaaatttc ttattgacgg caactaaatg gtgtttgtag catttttatc acacagtaga 901 ttccatccat tcactatact tttctaactg agttgtccta catacaagta catgttttta 961 atgttgtcag tcttctgtgc tgttcctgta agtttgctat taaaatacat taaactataa 1021 aaaaaaaaaa aaaaaaaaa //