LOCUS BC082989 2540 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens transmembrane protein 200B, mRNA (cDNA clone MGC:90489
IMAGE:5763085), complete cds.
ACCESSION BC082989
VERSION BC082989.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2540)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2540)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: d Column: 11.
FEATURES Location/Qualifiers
source 1..2540
/db_xref="H-InvDB:HIT000266026"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90489 IMAGE:5763085"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2540
/gene="TMEM200B"
/gene_synonym="TTMB"
/db_xref="GeneID:399474"
/db_xref="HGNC:HGNC:33785"
CDS 74..997
/gene="TMEM200B"
/gene_synonym="TTMB"
/codon_start=1
/product="transmembrane protein 200B"
/protein_id="AAH82989.1"
/db_xref="GeneID:399474"
/db_xref="HGNC:HGNC:33785"
/translation="MTAGSPEECGEVRRSPEGRVSRLGRRLGRRRRPRSPPEPLRVRA
RLRLRSPSGAFAALGALVVLVGMGIAVAGYWPHRAGAPGSRAANASSPQMSELRREGR
GGGRAHGPHERLRLLGPVIMGVGLFVFICANTLLYENRDLETRRLRQGVLRAQALRPP
DGPGWDCALLPSPGPRSPRAVGCAEPEIWDPSPRRGTSPVPSVRSLRSEPANPRLGLP
ALLNSYPLKGPGLPPPWGPRTQTGHVIITVQPSGSCIEHSKSLDLGLGELLLGAPAAR
DCAHRSWPRLDRLSLGGYAKLGGGGDLGARV"
BASE COUNT 562 a 709 c 755 g 514 t
ORIGIN
1 tggagcctcc gcgcgcggac tgggacccgg acccgcgcgg cgctgcggcg ccagagcgcc
61 cagacgacgc gagatgacgg ccgggagccc cgaagaatgc ggggaggtgc ggaggagccc
121 cgagggccgc gtctctcgct tgggccgccg cctgggccgc cgccggcgcc cgcgctcccc
181 gcccgagcct ctgcgggtgc gggcgcggct gcggctgcgc tcgccgtcgg gggcgttcgc
241 ggcgctgggg gcgctcgtgg tactggtggg tatgggcatt gcagtggccg gctactggcc
301 gcaccgggcc ggggccccag ggtcccgggc cgccaatgcc agctcgcccc agatgagcga
361 gctgcgacgc gagggtcgcg gcgggggccg ggctcacggc ccgcacgagc ggctgcggct
421 cctcgggccg gtgatcatgg gcgtcggcct gttcgtgttc atctgcgcca acacactgct
481 gtatgagaac cgagacttgg agacgcgacg gctccgccag ggggtgctgc gggcccaggc
541 gctccggccc cccgacggcc cgggctggga ctgcgccctc cttcccagcc ccggccctag
601 gagtccccga gccgtaggct gcgcagagcc agaaatctgg gacccgtccc cgcgtcgggg
661 tacttcaccc gtcccgtcag tgcggagtct gcgttcagag cccgctaatc ctcgcttggg
721 gttacctgcc ttgctcaaca gctacccgct gaagggcccc gggctgcccc caccctgggg
781 tccacggacg cagactggcc atgtgatcat caccgtgcag ccgtctggct cctgcattga
841 acattccaag tctctggatc tgggccttgg ggagctcctc cttggggccc cagcagctcg
901 ggactgtgct caccgaagct ggccacggct ggaccgcctc agtcttgggg gctatgccaa
961 attgggagga ggaggggact tgggggcccg ggtctgaaga gaggggagac agcctgctct
1021 gaggctgcag catggaccat gctaatagga ccaaaggacc aggagtccca acgtctaata
1081 gatgtttcag tcacatccca ggctggggat ggatgctctg accacagcag ctgtgaaggg
1141 catcctgacc tgcatgcggg cagagaaatg ccagctgcac cagggctcag tgagctggag
1201 agggtgcgtt tcactgtggg gtgtggagga ctcgcctcag gaatttcttc agcctctgta
1261 agtggcctta gccctaacag ggctggaggt ccaggccagg gtgactggga gatgtaccca
1321 gtgtcttggc aaacccaaga aagtggtggg caagggcccc taagactggg aggtaggttg
1381 ggatgttaca ggctggggca ggctccctcc aaggcggcac tggtgatgga gtgtggggcc
1441 tctgggaaga tggaccacgg gatgagactc tccactgcca tctgggacgg ggactgagcc
1501 ttgaactcct accacctcaa tccctttctt ccctcagcca tctggggtat atccctctag
1561 agctacacta ctgccaatgc cttcatactg agttctgggc ccctctgcaa ataagtctga
1621 gaagcccctt ctctccttcc tttatcgtgg cctatgctgc agaatctcac tgcagctggc
1681 aaaaggcatt ggccagctct cagaaatccc tttactcaac gttgaagctg cattttggtc
1741 aatgtgggta acttacttta gaaaatgact tgagtttagg tctcccccac ccatatttaa
1801 tttttcccaa gttgctggta gaagagaaat ttaaaagtgg atcaatcctc acagagagag
1861 ttctttttgt tgttgtttat tgaaaaaaat gcaatacaag aagcaagacc aaacagatat
1921 ctaaacacta caaccacttc tactacgaaa ggccaaaaca gcagacttga ttattgcctg
1981 tgtagtctaa agattctgcc aatctgattc tgctgcccga gttcctattt tttcaagaaa
2041 tgtaaacaac tacttgatat gattcataat tttaaaaaaa tttacaaagc tccttcattt
2101 ttgtcaccaa aataatacat ttgagagaga tttgtagaaa caaccagcct ggggctgaga
2161 tcctgggcag aaatttcccg tgagcatcaa aaggcgtcag tcaggccgca gctctggctc
2221 cagttcccga ggtttgttgt ctcctcaccc ccagctgcca agcatccccc caacacacac
2281 tgatgggccc agcggtggag gggggggtgg ggacggggat gggtcacggg gccctgacgg
2341 gtcccgcagt taggctccct gagccctcgg cttataaata caggtcttgc tttgtgggtg
2401 ggtgccagag tcctcatgtg gcttggagga aatctttatt tctcaaatta aaataaaatt
2461 gcagcgagag ttgtaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaaaaa
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