LOCUS BC082753 1211 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens NOL1/NOP2/Sun domain family, member 5C, mRNA (cDNA
clone MGC:99493 IMAGE:4542435), complete cds.
ACCESSION BC082753
VERSION BC082753.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1211)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1211)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23200005.
FEATURES Location/Qualifiers
source 1..1211
/db_xref="H-InvDB:HIT000265988"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99493 IMAGE:4542435"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1211
/gene="NSUN5C"
/gene_synonym="DKFZp434K058"
/gene_synonym="DKFZp666P104"
/gene_synonym="NOL1R2"
/gene_synonym="WBSCR20B"
/gene_synonym="WBSCR20C"
/db_xref="GeneID:260294"
/db_xref="HGNC:HGNC:16609"
CDS 142..1089
/gene="NSUN5C"
/gene_synonym="DKFZp434K058"
/gene_synonym="DKFZp666P104"
/gene_synonym="NOL1R2"
/gene_synonym="WBSCR20B"
/gene_synonym="WBSCR20C"
/codon_start=1
/product="NOL1/NOP2/Sun domain family, member 5C"
/protein_id="AAH82753.2"
/db_xref="GeneID:260294"
/db_xref="HGNC:HGNC:16609"
/translation="MLELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAP
MSWMPVPPQAIKTSHLAALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDF
LAVSPLDPRYREVHYVLLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCH
ALTFPSLQRLVYSMCSLCQEENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAE
HCLRASPKTTLSGGFFVAVIERVEMPTSASQAKASAPERTPSPAPKRKKRAKSCSRCL
HTALHIAEAPGSLLPGGKGRCLSSPWKTLGPHRRQQFAF"
BASE COUNT 254 a 380 c 342 g 235 t
ORIGIN
1 ggctgtacgc tgcggtggca ggcgtgctgg ccggcgtgga gagccgccag ggctctatca
61 aggggctggt gtactccagc aacttccagc ctcgatgact tacgagccct caaggggaag
121 cattttctcc tggacccctt gatgctggag ctgctggtgt ttcccgccca gacagatctg
181 catgaacacc cactgtaccg ggccggacac ctcattctgc aggacagggc cagctgtctc
241 ccagccatgc tgctggaccc ccgccaggct cccatgtcat ggatgcctgt gccaccccag
301 gcaataaaga ccagtcactt ggctgctctt ctgaagaacc aagggaagat ctttgccttt
361 gacctggatg ccaggcggct ggcatccatg gccacgctgc tggcctgggc tggcgtctcc
421 tgctgtgagc tggctgagga ggacttcctg gcggtctccc ccttagatcc gcgctatcgt
481 gaggtccact atgtcctgct ggatccttcc tgcagtggct cgggtatgcc gagcagacag
541 ctggaggagc ccggggcagg gacacctagc ccggtgcgtc tgcatgccct ggcagggttc
601 cagcagcgag ccctgtgcca cgcgctcact ttcccttccc tgcagcggct cgtctactcc
661 atgtgctccc tctgccagga ggagaatgaa gacatggtac aagatgcgct gcagcagaac
721 ccgggcgcct tcaggctagc tcccgccctg cctgcccggc cccaccgagg cctgagcacg
781 ttcccgggtg ccgagcactg cctccgggct tcccccaaga ccacgcttag cggtggcttc
841 ttcgttgctg taattgaacg ggtcgagatg ccgacctcag cctcacaggc caaagcatca
901 gcaccagaac gcacacccag cccagcccca aagagaaaga agagagcaaa aagctgcagc
961 cggtgcttgc acaccgcctt gcacatagca gaggctccgg gctcactcct tcctggtgga
1021 aaaggaagat gcctgtcctc tccgtggaag accctgggcc ctcaccgcag gcagcagttt
1081 gcgttttgaa aggttattgg gtcccttcct cgggctgtgt tcttgctggt gagcaaaagt
1141 gttgcctgca gaaataaaat gcagaacgta ctctacgata aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaaaaa a
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