LOCUS BC081567 1230 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA
(cDNA clone MGC:88718 IMAGE:4131303), complete cds.
ACCESSION BC081567
VERSION BC081567.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1230)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1230)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: b Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50233912.
FEATURES Location/Qualifiers
source 1..1230
/db_xref="H-InvDB:HIT000265941"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88718 IMAGE:4131303"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1230
/gene="HMGN2"
/gene_synonym="MGC5629"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
CDS 89..361
/gene="HMGN2"
/gene_synonym="MGC5629"
/codon_start=1
/product="high-mobility group nucleosomal binding domain
2"
/protein_id="AAH81567.1"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
/translation="MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKA
PAKKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGDAK"
BASE COUNT 374 a 255 c 275 g 326 t
ORIGIN
1 cgagaacgac ccccggaccg accaaagccc gcgcgccgct gcatcccgcg tccagcacct
61 acgtcccgct gccgtcgccg ccgccaccat gcccaagaga aaggctgaag gggatgctaa
121 gggagataaa gcaaaggtga aggacgaacc acagagaaga tccgcgaggt tgtctgctaa
181 acctgctcct ccaaagccag agcccaagcc taaaaaggcc cctgcaaaga agggagagaa
241 ggtacccaaa gggaaaaagg gaaaagctga tgctggcaag gaggggaata accctgcaga
301 aaatggagat gccaaaacag accaggcaca gaaagctgaa ggtgctggag atgccaagtg
361 aagtgtgtgc atttttgata actgtgtact tctggtgact gtacagtttg aaatactatt
421 ttttatcaag ttttataaaa atgcagaatt ttgttttact tttttttttt tttttaaaag
481 ctatgttgtt agcacacaga acacttcatt gttgtttttg ggggaagggg catatgtcac
541 taatagaatg tctccaaagc tggattgatg tggagaaaac acctttccct tctagttttg
601 agagacttcc tcttggctcc caggaggagg gattccctga ctttgacaca catggccacc
661 ttggcacaaa agccttgtgg tatagaaaaa caaatttgtt tttatgtcct cttctccctt
721 tccatctttc agcatagact taactccctt aagcccagac atctgttgag acctgacccc
781 tagtcattgg ttaccagtgt gtcaggcaat ctggactttc cagtgatgcc actgagatgg
841 cacctgtcaa aagagcagtg gttccatttc tagattgtgg atcttcagat aaattctgcc
901 attttcattt cacttcctga aagtcagggt cggcttgtga aaagttgtta aacaacatgc
961 taaatgtgaa atgtcaaccc tcactctaaa ctttccctgt tcagagcatc agatgaagac
1021 ttcattgggt tttatagtgg ctttctgatt tttggtagtc cattgaagaa gggagtttga
1081 aagttgttgt atactgttaa cgattgtctg cccatgtcct gcctgaaata ccatgattgt
1141 ttatggaaag tatctttaat aaagctggat acagtttggc ttggaaaaaa aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//