LOCUS BC080599 1250 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens calcyphosine, mRNA (cDNA clone MGC:99565
IMAGE:4876766), complete cds.
ACCESSION BC080599
VERSION BC080599.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1250)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1250)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: e Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18104965.
FEATURES Location/Qualifiers
source 1..1250
/db_xref="H-InvDB:HIT000265865"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99565 IMAGE:4876766"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1250
/gene="CAPS"
/gene_synonym="CAPS1"
/db_xref="GeneID:828"
/db_xref="HGNC:HGNC:1487"
/db_xref="MIM:114212"
CDS 97..666
/gene="CAPS"
/gene_synonym="CAPS1"
/codon_start=1
/product="calcyphosine"
/protein_id="AAH80599.1"
/db_xref="GeneID:828"
/db_xref="HGNC:HGNC:1487"
/db_xref="MIM:114212"
/translation="MDAVDATMEKLRAQCLSRGASGIQGLARFFRQLDRDGSRSLDAD
EFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAF
AKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLA
EFQDYYSGVSASMNTDEEFVAMMTSAWQL"
BASE COUNT 285 a 382 c 399 g 184 t
ORIGIN
1 gcaacagtct ccccaggcac aacacagcta acacaaggcc ccgcaggcag gactctggga
61 cagacgcagg ccagctgccc agagcccaga ccaagcatgg acgccgtgga tgccaccatg
121 gagaaactcc gggcacagtg cctgtcccgc ggggcctcgg gcatccaggg cctggccagg
181 tttttccgcc aactagaccg ggacgggagc agatccctgg acgctgatga gttccggcag
241 ggtctggcca aactcgggct ggtgctggac caggcggagg cagagggtgt gtgcaggaag
301 tgggaccgca atggcagcgg gacgctggat ctggaggagt tccttcgggc gctgcggccc
361 cccatgtccc aggcccggga ggctgtcatc gcagctgcat ttgccaagct ggaccgcagc
421 ggggacggcg tcgtgacggt ggacgacctc cgcggggtgt acagtggccg tgcccacccc
481 aaggtgcgca gtggggagtg gaccgaggac gaggtgctgc gccgcttcct ggacaacttc
541 gactcctctg agaaggacgg gcaggtcaca ctggcggaat tccaggacta ctacagcggc
601 gtgagtgcct ccatgaacac ggatgaggag ttcgtggcca tgatgaccag tgcctggcag
661 ctgtgagcag ctccggctca gccctgctgc cctggcctgt cactccccac ccctgccgga
721 gacctccctt ccctgggccc cttctctcct gggcagccac accacagagc ggggaggggc
781 aggtggggga atggaggctg caggactggc tagaccaggt ccctgccggt ccaccaggcg
841 gaggtgggac aaaggtccta acaggagtca ctggctcagg accccaggga gaaacgctct
901 ccccacccac gccatgctga ccagaggtct tgcagcccct gtggatgccc ccgccgaggt
961 cccccgatcc ccgcacccgg actgctgctc cctgcccctc ccttgcgggt cccccaggaa
1021 gccaggtgac cccaggtggg aggctgtgtg tggaggccat cctggaagga agtttagacc
1081 tgcccaggtg tggagcgagg ggcacagggg catcctaacc tcagaaactg aaataaagcc
1141 tttgaaaaaa aaatctgtaa aacatcaacc cccaatcaga agatggcaaa tggggaataa
1201 aaatagcagg taacacgtaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//