LOCUS BC080529 1764 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tripartite motif-containing 63, mRNA (cDNA clone
MGC:99548 IMAGE:4862321), complete cds.
ACCESSION BC080529
VERSION BC080529.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1764)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1764)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: e Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19924162.
FEATURES Location/Qualifiers
source 1..1764
/db_xref="H-InvDB:HIT000265800"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99548 IMAGE:4862321"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1764
/gene="TRIM63"
/gene_synonym="FLJ32380"
/gene_synonym="IRF"
/gene_synonym="MURF1"
/gene_synonym="MURF2"
/gene_synonym="SMRZ"
/db_xref="GeneID:84676"
/db_xref="HGNC:HGNC:16007"
/db_xref="MIM:606131"
CDS 119..1180
/gene="TRIM63"
/gene_synonym="FLJ32380"
/gene_synonym="IRF"
/gene_synonym="MURF1"
/gene_synonym="MURF2"
/gene_synonym="SMRZ"
/codon_start=1
/product="tripartite motif-containing 63"
/protein_id="AAH80529.1"
/db_xref="GeneID:84676"
/db_xref="HGNC:HGNC:16007"
/db_xref="MIM:606131"
/translation="MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLC
RKCANDIFQAANPYWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENII
DIYKQECSSRPLQKGSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQ
SVFQGQKTELNNCISMLVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYA
ILDEKKSELLQRITQEQEKKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFL
LTAKQLIKSIVEASKGCQLGKTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFI
EEEDQEEEESTEGKEEGHQ"
BASE COUNT 478 a 398 c 512 g 376 t
ORIGIN
1 gaaggaagcc aacaggatcc gacccggtgt tttgtgacaa aggcaagacc cccaggtcta
61 cttagagcaa agttagtaga ggaggcagct aggcgtggct ctcattcctt cccacagaat
121 ggattataag tcgagcctga tccaggatgg gaatcccatg gagaacttgg agaagcagct
181 gatctgccct atctgcctgg agatgtttac caagccagtg gtcatcttgc cgtgccagca
241 caacctgtgc cggaagtgtg ccaatgacat cttccaggct gcaaatccct actggaccag
301 ccggggcagc tcagtgtcca tgtctggagg ccgtttccgc tgccccacct gccgccacga
361 ggtgatcatg gatcgtcacg gagtgtacgg cctgcagagg aacctgctgg tggagaacat
421 catcgacatc tacaaacagg agtgctccag tcggccgctg cagaagggca gtcaccccat
481 gtgcaaggag cacgaagatg agaaaatcaa catctactgt ctcacgtgtg aggtgcccac
541 ctgctccatg tgcaaggtgt ttgggatcca caaggcctgc gaggtggccc cattgcagag
601 tgtcttccag ggacaaaaga ctgaactgaa taactgtatc tccatgctgg tggcggggaa
661 tgaccgtgtg cagaccatca tcactcagct ggaggattcc cgtcgagtga ccaaggagaa
721 cagtcaccag gtaaaggaag agctgagcca gaagtttgac acgttgtatg ccatcctgga
781 tgagaagaaa agtgagttgc tgcagcggat cacgcaggag caggagaaaa agcttagctt
841 catcgaggcc ctcatccagc agtaccagga gcagctggac aagtccacaa agctggtgga
901 aactgccatc cagtccctgg acgagcctgg gggagccacc ttcctcttga ctgccaagca
961 actcatcaaa agcattgtgg aagcttccaa gggctgccag ctggggaaga cagagcaggg
1021 ctttgagaac atggacttct ttactttgga tttagagcac atagcagacg ccctgagagc
1081 cattgacttt gggacagatg aggaagagga agaattcatt gaagaagaag atcaggaaga
1141 ggaagagtcc acagaaggga aggaagaagg acaccagtaa ggagctggat gaatgagagg
1201 cccccagatg cagagagact ggagagggtg gggaggggcc cagcggcctt ggtgacaggc
1261 ccagggtggg aggggtcggg gcccctggag gggcaatggg gaggtgatgt cttctctctg
1321 ctcagagagc agggactagg gtaggaccct caccgctgcg tccagcagac actgaaccag
1381 aattggaaac gtgcttgaaa caatcacaca ggacactttt ctacattggt gcaaaatgga
1441 atattttgta catttttaaa atgtgatttt tgtatatact tgtatatgta tgccaatttg
1501 gtgctttttg taaaggaact tttgtataat aatgcctggt cattgggtga cctgcgattg
1561 tcagaaagag gggaaggaag ccaggttgat acagctgccc acttcctttc ctgagcagga
1621 ggatggggta gcactcacag ggacgatgtg ctgtatttca gtgtctatcc cagacatacg
1681 gggtggtaac tgagtttgtg ttatatgttg ttttaataaa tgcacaatgc tctcttcctg
1741 ttcttcaaaa aaaaaaaaaa aaaa
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