LOCUS BC078669 3248 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD6 molecule, mRNA (cDNA clone MGC:88709
IMAGE:6302947), complete cds.
ACCESSION BC078669
VERSION BC078669.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3248)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3248)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51036597.
FEATURES Location/Qualifiers
source 1..3248
/db_xref="H-InvDB:HIT000265755"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88709 IMAGE:6302947"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3248
/gene="CD6"
/gene_synonym="TP120"
/db_xref="GeneID:923"
/db_xref="HGNC:HGNC:1691"
/db_xref="MIM:186720"
CDS 165..2171
/gene="CD6"
/gene_synonym="TP120"
/codon_start=1
/product="CD6 molecule"
/protein_id="AAH78669.1"
/db_xref="GeneID:923"
/db_xref="HGNC:HGNC:1691"
/db_xref="MIM:186720"
/translation="MWLFFGITGLLTAALSGHPSPAPPDQLNTSSAESELWEPGERLP
VRLTNGSSSCSGTVEVRLEASWEPACGALWDSRAAEAVCRALGCGGAEAASQLAPPTP
ELPPPPAAGNTSVAANATLAGAPALLCSGAEWRLCEVVEHACRSDGRRARVTCAENRA
LRLVDGGGACAGRVEMLEHGEWGSVCDDTWDLEDAHVVCRQLGCGWAVQALPGLHFMP
GRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVCSEHQSWRLTGGADRCEG
QVEVHFRGVWNTVCDSEWYPSEAKVLCQSLGCGTAVERPKGLPHSLSGRMYYSCNGEE
LTLSNCSWRFNNSNLCSQSLAARVLCSASRSLHNLSTPEVPASVQTVTIESSVTVKIE
NKESRELMLLIPSIVLGILLLGSLIFIAFILLRIKGKYALPVMVNHQHLPTTIPAGSN
SYQPVPITIPKEVFMLPIQVQAPPPEDSDSGSDSDYEHYDFSAQPPVALTTFYNSQRH
RVTDEEVQQSRFQMPPLEEGLEELHASHIPTANPGHCITDPPSLGPQYHPRSNSESST
SSGEDYCNSPKSKLPPWNPQVFSSERSSFLEQPPNLELASTQPAFSAGPPADDSSSTS
SGEWYQNFQPPPQPPSEEQFGCPGSPSPQPDSTDNDDYDDISAA"
BASE COUNT 660 a 1033 c 970 g 585 t
ORIGIN
1 catgcgtgtc ggagaggaga gagcagagag agacacagga acaagaacag caaagggtag
61 agcagacctg cgccaggggc gcacaacggc cgtgtccacc tcccggcccc aagatggtgc
121 ttcccacagg cagccacgcg tagcagccag agacagctcc agacatgtgg ctcttcttcg
181 ggatcactgg attgctgacg gcagccctct caggtcatcc atctccagcc ccacctgacc
241 agctcaacac cagcagtgca gagagtgagc tctgggagcc aggggagcgg cttccggtcc
301 gtctgacaaa cgggagcagc agctgcagcg ggacggtgga ggtgcggctc gaggcgtcct
361 gggagcccgc gtgcggggcg ctctgggaca gccgcgccgc cgaggccgtg tgccgagcac
421 tgggctgcgg cggggcggag gccgcctctc agctcgcccc gccgacccct gagctgccgc
481 ccccgcctgc agccgggaac accagcgtag cagctaatgc cactctggcc ggggcgcccg
541 ccctcctgtg cagcggcgcc gagtggcggc tctgcgaggt ggtggagcac gcgtgccgca
601 gcgacgggag gcgggcccgt gtcacctgtg cagagaaccg cgcgctgcgc ctggtggacg
661 gtggcggcgc ctgcgccggc cgcgtggaga tgctggagca tggcgagtgg ggatcagtgt
721 gcgatgacac ttgggacctg gaggacgccc acgtggtgtg caggcaactg ggctgcggct
781 gggcagtcca ggccctgccc ggcttgcact tcatgcccgg ccgcgggcct atccaccggg
841 accaggtgaa ctgctcgggg gccgaagctt acctgtggga ctgcccgggg ctgccaggac
901 agcactactg cggccacaaa gaggacgcgg gcgtggtgtg ctcagagcac cagtcctggc
961 gcctgacagg gggcgctgac cgctgcgagg ggcaggtgga ggtacacttc cgaggggtct
1021 ggaacacagt gtgtgacagt gagtggtacc catcggaggc caaggtgctc tgccagtcct
1081 tgggctgtgg aactgcggtt gagaggccca aggggctgcc ccactccttg tccggcagga
1141 tgtactactc atgcaatggg gaggagctca ccctctccaa ctgctcctgg cggttcaaca
1201 actccaacct ctgcagccag tcgctggcag ccagggtcct ctgctcagct tcccggagtt
1261 tgcacaatct gtccactccc gaagtccctg caagtgttca gacagtcact atagaatctt
1321 ctgtgacagt gaaaatagag aacaaggaat ctcgggagct aatgctcctc atcccctcca
1381 tcgttctggg aattctcctc cttggctccc tcatcttcat agccttcatc ctcttgagaa
1441 ttaaaggaaa atatgccctc cccgtaatgg tgaaccacca gcacctaccc accaccatcc
1501 cggcagggag caatagctat caaccggtcc ccatcaccat ccccaaagaa gttttcatgc
1561 tgcccatcca ggtccaggcc ccgccccctg aggactcaga ctctggctcg gactcagact
1621 atgagcacta tgacttcagc gcccagcctc ctgtggccct gaccaccttc tacaattccc
1681 agcggcatcg ggtcacagat gaggaggtcc agcaaagcag gttccagatg ccacccttgg
1741 aggaaggact tgaagagttg catgcctccc acatcccaac tgccaaccct ggacactgca
1801 ttacagaccc gccatccctg ggccctcagt atcacccgag gagcaacagt gagtcgagca
1861 cctcttcggg ggaggattac tgcaatagtc ccaaaagcaa gctgcctcca tggaaccccc
1921 aggtgttttc ttcagagagg agttccttcc tggagcagcc cccaaacttg gagctggcca
1981 gcacccagcc agccttttca gcagggcccc cggctgatga cagctccagc acctcatccg
2041 gggagtggta ccagaacttc cagccaccac cccagccccc ttcggaggag cagtttggct
2101 gtccagggtc ccccagccct cagcctgact ccaccgacaa cgatgactac gatgacatca
2161 gcgcagccta ggccggggcc agccgaggct cctggggtgg ctctgaccct ctggcctcct
2221 gctctaccta ctccctttcc cctttcccac cctcccagct cacctcccca tggagctgag
2281 aggcctccct tggagagatg gaaggaaacg ttataccttg tacccctcgg tctccatcca
2341 tcaagccaaa cctgctgcca cagccctccc ccggccccag atagcagccc cagggaggat
2401 gctgcctcca agaggtgtga gccctctgtc tcggggatga acaagcagag tctgggctac
2461 ctcttgacag ctggtggagg ggagttgggg agctggactg gatgactctg gaggcccctt
2521 ccaaacctca agtgtccggc gctttgattg cctgagtttc tgacacttca gggcccagag
2581 gtcctgcgag gggcagaact ggacccccat gccagtgctg ctgcaggagg gcccatatac
2641 tagggtctgc tgagctgttg tcactgatcg gtgggcgctg ggggggtagg gtagcacacc
2701 agctgtccca ggctttgctc cgggcggtaa ctgcacttgg gcagggaata tagccttcct
2761 gggcacaact agctgacaat gacaggttga ctgtgtaccc ccaaccaagg agctggggcc
2821 caaggccagt cctgccccag agacactcca agtccgccag gggcacagac cagttctgca
2881 gtgactgtcc ctggacaatg ggtctttatt ctgagtttcc tatggtttac aaagagggcc
2941 ccagcccagc cccaccacag atcccagaga taggggccca gtctccatgg gggcaaggag
3001 catagagatg ttttccagga aggggctcag aagctgcact aggccccgag tccccatgtg
3061 tctccttgaa ttgatgagga tgctcctggg agggatgcgt gactatgtgg tgttgcaccc
3121 ggggctgcaa acgtctccgt gcagccccca gagagaggcc catgggctca gaccaggctt
3181 tgttgtcctg ctctgagtat cctgagatta aactgaattg ctgaatgaaa aaaaaaaaaa
3241 aaaaaaaa
//