LOCUS BC078173 2030 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAP1B, member of RAS oncogene family, mRNA (cDNA clone
MGC:87966 IMAGE:6015817), complete cds.
ACCESSION BC078173
VERSION BC078173.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2030)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2030)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58219793.
FEATURES Location/Qualifiers
source 1..2030
/db_xref="H-InvDB:HIT000265732"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87966 IMAGE:6015817"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2030
/gene="RAP1B"
/gene_synonym="DKFZP586H0723"
/gene_synonym="K-REV"
/gene_synonym="RAL1B"
/db_xref="GeneID:5908"
/db_xref="HGNC:HGNC:9857"
/db_xref="MIM:179530"
CDS 162..716
/gene="RAP1B"
/gene_synonym="DKFZP586H0723"
/gene_synonym="K-REV"
/gene_synonym="RAL1B"
/codon_start=1
/product="RAP1B, member of RAS oncogene family"
/protein_id="AAH78173.1"
/db_xref="GeneID:5908"
/db_xref="HGNC:HGNC:9857"
/db_xref="MIM:179530"
/translation="MREYKLVVLGSGGVGNSALTVQFVQGIFVEKYDPTIEDSYRKQV
EVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILR
VKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYD
LVRQINRKTPVPGKARKKSSCQLL"
BASE COUNT 661 a 335 c 411 g 623 t
ORIGIN
1 ccagattcag gcgtgtaaac cagccggagc ggcgcggcag cggcaggacc gccgtggcgc
61 ctagagtagc gacccggggg agcgcggggc gacgctggct gcagggaccc ggtgacagcg
121 tgagaggttc gcagagtact aggttttgac aagcttgcat catgcgtgag tataagctag
181 tcgttcttgg ctcaggaggc gttggaaact ctgctttgac tgtacaattt gttcaaggaa
241 tttttgtaga aaaatacgat cctacgatag aagattctta tagaaagcaa gttgaagtag
301 atgcacaaca gtgtatgctt gaaatcttgg atactgcagg aacggagcaa tttacagcaa
361 tgagggattt atacatgaaa aatggacaag gatttgcatt agtttattcc atcacagcac
421 agtccacatt taacgattta caagacctga gagaacagat tcttcgagtt aaagacactg
481 atgatgttcc aatgattctt gttggtaata agtgtgactt ggaagatgaa agagttgtag
541 ggaaggaaca aggtcaaaat ctagcaagac aatggaacaa ctgtgcattc ttagaatctt
601 ctgcaaaatc aaaaataaat gttaatgaga tcttttatga cctagtgcgg caaattaaca
661 gaaaaactcc agtgcctggg aaggctcgca aaaagtcatc atgtcagctg ctttaatata
721 ctaaatgcat tgtagctctg agccaggtct gaagaactgt tgcccaattc aacagtgcca
781 gcattccaac tttgttaaac ctaccaacat cttaaatgga ctttcctgtg gtggtaccct
841 ttaagaggcg gatgaaagct actatatcag tttgcacatt ctaatcactt tccagtatca
901 caagagagat ttttacttat ataatagtcc tagagtttgc agctggtaaa accagaggct
961 acatccagta ttactgctaa gagacattct tcatccacca atgttgtaca tgtatgaaaa
1021 tggtgtactg tatactttaa catgccccat actttgtatt ggagagtaca ataatgtaaa
1081 tcctaaaagc accactattt tagcataata aaagaaagtc caaagagctc ctatatagac
1141 tactccagat aacttcgctt ctttgatact tgtagcttat tgtaattttt tttaagaaat
1201 tcaaggtcat tattattgta caaaataagc gctttgatta acacagctat atagtttttt
1261 taatttttaa aaaacctgtg gagacggtga tcttgtcttt aaaacatgat agtcctttca
1321 gtataatgtc ttagattaaa gacgttgcct ttaatatctg ttgggaagga aatgtccaga
1381 cttttcaaat ctcttattat atgtttcctt tttttgttta catagggaac aatgtttata
1441 gtcgtgtgta cagtgggggt ctacaacaag aagtgtatat tttcaaacaa ttttttaatg
1501 atttaacaat ttttgtaaat cattttcagg cttctgcagc tgtagattct cactgtgaat
1561 cccttgcttg ctcatgcata agtgtatttg caataccaaa tatacaggtt tagtattttt
1621 gcctgttagt gattgtttca catgtgtaac gttttggttg agatgttaaa tggtggacga
1681 gtactgtgga tgtgaatgtg ggaagtaatt ttaatcatat gtaattggtc acaaggccta
1741 atttgcagta actattgctg ttttatttaa caatcccttg ttgctttgta tgcattaatg
1801 tttggatgta aagattgtgt gtctatccaa cagggagcca cagtatttaa attgaccaac
1861 ctaatgttac aactactttg aggtggccaa atgtaaacta aaagccttaa ttaaagtggt
1921 gcaattttgt ataacttagc atcagtagtt caataaattt ggattgccat gcaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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