LOCUS BC075862 3024 bp mRNA linear HUM 07-JUL-2004
DEFINITION Homo sapiens calpain 1, (mu/I) large subunit, mRNA (cDNA clone
MGC:90445 IMAGE:5223130), complete cds.
ACCESSION BC075862
VERSION BC075862.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3024)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3024)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: l Column: 18.
FEATURES Location/Qualifiers
source 1..3024
/db_xref="H-InvDB:HIT000265674"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90445 IMAGE:5223130"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3024
/gene="CAPN1"
/gene_synonym="CANP"
/gene_synonym="CANPL1"
/gene_synonym="muCANP"
/gene_synonym="muCL"
/db_xref="GeneID:823"
/db_xref="MIM:114220"
CDS 101..2245
/gene="CAPN1"
/gene_synonym="CANP"
/gene_synonym="CANPL1"
/gene_synonym="muCANP"
/gene_synonym="muCL"
/codon_start=1
/product="CAPN1 protein"
/protein_id="AAH75862.1"
/db_xref="GeneID:823"
/db_xref="MIM:114220"
/translation="MSEEIITPVYCTGVSAQVQKQRARELGLGRHENAIKYLGQDYEQ
LRVRCLQSGTLFRDEAFPPVPQSLGYKDLGPNSSKTYGIKWKRPTELLSNPQFIVDGA
TRTDICQGALGDCWLLAAIASLTLNDTLLHRVVPHGQSFQNGYAGIFHFQLWQFGEWV
DVVVDDLLPIKDGKLVFVHSAEGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFT
GGVTEWYELRKAPSDLYQIILKALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSV
TGAKQVNYRGQVVSLIRMRNPWGEVEWTGAWSDSSSEWNNVDPYERDQLRVKMEDGEF
WMSFRDFMREFTRLEICNLTPDALKSRTIRKWNTTLYEGTWRRGSTAGGCRNYPATFW
VNPQFKIRLDETDDPDDYGDRESGCSFVLALMQKHRRRERPFGRDMETIGFAVYEVPP
ELVGQPAVHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYVVVPSTFEPNKEGD
FVLRFFSEKSAGTVELDDQIQANLPDEQVLSEEEIDENFKALFRQLAGEDMEISVKEL
RTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIF
RKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSEPDLAVDFDNFVCCLVRL
ETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA"
BASE COUNT 655 a 894 c 901 g 574 t
ORIGIN
1 tggcccccgg cctgcggagg gaggggcggg gagacaccgt gagtaagaga tagtcagaga
61 ccgtgccgga gagataaggg agagccgaga ggaagcgggg atgtcggagg agatcatcac
121 gccggtgtac tgcactgggg tgtcagccca agtgcagaag cagcgggcca gggagctggg
181 cctgggccgc catgagaatg ccatcaagta cctgggccag gattatgagc agctgcgggt
241 gcgatgcctg cagagtggga ccctcttccg tgatgaggcc ttccccccgg taccccagag
301 cctgggttac aaggacctgg gtcccaattc ctccaagacc tatggcatca agtggaagcg
361 tcccacggaa ctgctgtcaa acccccagtt cattgtggat ggagctaccc gcacagacat
421 ctgccaggga gcactggggg actgctggct cttggcggcc atcgcctccc tcactctcaa
481 cgacaccctc ctgcaccgag tggttccgca cggccagagc ttccagaatg gctatgccgg
541 catcttccat ttccagctgt ggcaatttgg ggagtgggtg gacgtggtcg tggatgacct
601 gctgcccatc aaggacggga agctagtgtt cgtgcactct gccgaaggca acgagttctg
661 gagcgccctg cttgagaagg cctatgccaa ggtaaatggc agctacgagg ccctgtcagg
721 gggcagcacc tcagagggct ttgaggactt cacaggcggg gttaccgagt ggtacgagtt
781 gcgcaaggct cccagtgacc tctaccagat catcctcaag gcgctggagc ggggctccct
841 gctgggctgc tccatagaca tctccagcgt tctagacatg gaggccatca ctttcaagaa
901 gttggtgaag ggccatgcct actctgtgac cggggccaag caggtgaact accgaggcca
961 ggtggtgagc ctgatccgga tgcggaaccc ctggggcgag gtggagtgga cgggagcctg
1021 gagcgacagc tcctcagagt ggaacaacgt ggacccatat gaacgggacc agctccgggt
1081 caagatggag gacggggagt tctggatgtc attccgagac ttcatgcggg agttcacccg
1141 cctggagatc tgcaacctca cacccgacgc cctcaagagc cggaccatcc gcaaatggaa
1201 caccacactc tacgaaggca cctggcggcg ggggagcacc gcggggggct gccgaaacta
1261 cccagccacc ttctgggtga accctcagtt caagatccgg ctggatgaga cggatgaccc
1321 ggacgactac ggggaccgcg agtcaggctg cagcttcgtg ctcgccctta tgcagaagca
1381 ccgtcgccgc gagcgcccct tcggccgcga tatggagact attggcttcg cggtctacga
1441 ggtccctccg gagctggtgg gccagccggc cgtacacttg aagcgtgact tcttcctggc
1501 caatgcgtct cgggcgcgct cagagcagtt catcaacctg cgagaggtca gcacccgctt
1561 ccgcctgcca cccggggagt atgtggtggt gccctccacc ttcgagccca acaaggaggg
1621 cgacttcgtg ctgcgcttct tctcagagaa gagtgctggg actgtggagc tggatgacca
1681 gatccaggcc aatctccccg atgagcaagt gctctcagaa gaggagattg acgagaactt
1741 caaggccctc ttcaggcagc tggcagggga ggacatggag atcagcgtga aggagttgcg
1801 gacaatcctc aataggatca tcagcaaaca caaagacctg cggaccaagg gcttcagcct
1861 agagtcgtgc cgcagcatgg tgaacctcat ggatcgtgat ggcaatggga agctgggcct
1921 ggtggagttc aacatcctgt ggaaccgcat ccggaattac ctgtccatct tccggaagtt
1981 tgacctggac aagtcgggca gcatgagtgc ctacgagatg cggatggcca ttgagtcggc
2041 aggcttcaag ctcaacaaga agctgtacga gctcatcatc acccgctact cggagcccga
2101 cctggcggtc gactttgaca atttcgtttg ctgcctggtg cggctagaga ccatgttccg
2161 atttttcaaa actctggaca cagatctgga tggagttgtg acctttgact tgtttaagtg
2221 gttgcagctg accatgtttg catgaggcag ggactcggtc ccccttgccg tgctcccctc
2281 cctcctcgtc tgccaagcct cgcctcctac cacaccacac caggccaccc cagctgcaag
2341 tgccttcctt ggagcagaga ggcagcctcg tcctcctgtc ccctctcctc ccagccacca
2401 tcgttcatct gctccgggca gaactgtgtg gcccctgcct gtgccagcca tgggctcggg
2461 atggactccc tgggccccac ccattgccaa gccaggaagg cagctttcgc ttgttcctgc
2521 ctcgggacag ccccgggttt ccccagcatc ctgatgtgtc ccctctcccc acttcagagg
2581 ccacccactc agcaccaccg gcctggcctt gcctgcagac tataaactat aaccactagc
2641 tcgacacagt ctgcagtcca ggcgtgtgga gccgcctccc ggctcgggga ggccccgggg
2701 ctgggaacgc ctgtgccttc ctgcgccgaa gccaacgccc cctctgtcct tccctggccc
2761 tgctgccgac caggagctgc ccagcctgtg ggcggtcggc cttccctcct tcgctccttt
2821 tttatattag tgattttaaa ggggactctt cagggacttg tgtactggtt atgggggtgc
2881 cagaggcact aggcttgggg tggggaggtc ccgtgttcca tatagaggaa ccccaaataa
2941 taaaaggccc cacatctgtc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaaaaaaaa aaaaaaaaaa aaaa
//