LOCUS BC075815 4219 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens family with sequence similarity 21, member A, mRNA
(cDNA clone IMAGE:3867823), partial cds.
ACCESSION BC075815
VERSION BC075815.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4219)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4219)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: a Column: 22.
FEATURES Location/Qualifiers
source 1..4219
/db_xref="H-InvDB:HIT000265630"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3867823"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..4219
/gene="FAM21A"
/gene_synonym="bA56A21.1"
/db_xref="GeneID:387680"
/db_xref="HGNC:HGNC:23416"
CDS <1..3646
/gene="FAM21A"
/gene_synonym="bA56A21.1"
/codon_start=2
/product="FAM21A protein"
/protein_id="AAH75815.1"
/db_xref="GeneID:387680"
/db_xref="HGNC:HGNC:23416"
/translation="PVLKAEAEKTEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQ
LDIKAGNSDSEEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEE
GSVGSDRGSIVDTEEEKEEEESDEDFAHHSDNEQNRHTTQMSDEEEDDDGCDLFADSE
KEEEDIEDIEENTRPKRSRPTSFADELAARIKGDAVGRVDEEPTTLPSGEAKPRKTLK
EKKERRTPSDDEEDNLFAPPKLTDEDFSPFGSGGGLFSGGKGLFDDEDEESDLFTEAP
QDRQAGASVKEESSSSKPGKKIPAGAVSVFLGDTDVFGAASVPSMKEPQKPEQPTPRK
SPYEPPPTGLFDDDDGDDDDDFFSAPHSKPSKTGKVQSTADIFGDEEGDLFKEKAVAS
PEATVSQTDENKARAEKKVTLSSSKNLKPSSETKTQKGLFSDEEDSEDLFSSQSASKL
KGASLLPGKLPTLVSLFDDEDEEDNLFGGTAAKKQTLCLQAQREEKAKASELSKKKAS
ALLFSSDEEDQWNIPASQTHLASDSRSKGEPRDSGTLQSQEAKAVKKTSLFEEDEEDD
LFAIAKDSQKKTQRVSLLFEDDVDSGGSLFGSPPTSVPPATKKKETVSEAPPLLFSDE
EEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHSDLFSSSSP
WDKGTKPRTKTVLSLFDEEEDKMEDQNTIQAPQKEVGKGRDPDAHPKSTGVFQDEELL
FSHKLQKDNDPDVDLFAGTKKTKLLEPSVGSLFGDDEDDDLFSSAKSQPLVQEKKRVV
KKDHSVDSFKNQKHPESIQGSKEKGIWKPETPQANLAINPAALLPTAASQISEVKPVL
PELAFPSSEHRRSHGLESVPVLPGSGEAGVSFDLPAQADTLHSANKSRVKMRGKRRPQ
TRAARRLAAQESSETEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTEEALAAA
AAPWEGGPVPGVDRSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAKIAEN
PANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVK
KNETKSNSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL
TVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKTTKPKSRSAQAAPEPRFEHKVSNIF
DDPLNAFGGQ"
BASE COUNT 1296 a 911 c 1064 g 948 t
ORIGIN
1 gccagtactc aaggctgagg cagaaaaaac agagcaggag aagacacgag agcagaaaga
61 agtagatctc attcctaaag tccaggaggc tgtgaactat ggcttacaag tattggacag
121 tgcctttgag caacttgata tcaaagcagg aaactcagac tccgaggaag atgatgctaa
181 tgggcgggtg gaactgatcc ttgaaccaaa ggatctatac attgatcgtc ctttaccata
241 tctcattggg tcaaagctgt tcatggaaca agaagatgta ggtcttggag agctgtccag
301 tgaagaaggc tctgtaggca gtgatcgtgg cagtattgtg gacactgagg aagagaaaga
361 agaggaggag tcagatgaag attttgccca tcatagtgac aatgaacaaa accggcacac
421 cacacaaatg agtgatgagg aagaggatga tgatggctgt gaccttttcg ctgactctga
481 gaaggaggag gaagatattg aggacattga agaaaatact agacctaaaa gaagcagacc
541 tacatcgttt gcagatgagc tggctgcccg catcaagggg gatgccgtgg gtcgagtgga
601 cgaggagccg acaaccttac cctcaggaga agcaaaacct cggaagacac tcaaagagaa
661 gaaggaaagg agaactcctt cagacgatga agaggataac ttattcgcac cccccaagct
721 gaccgacgag gacttctcgc catttggctc tggaggtggc ctgttcagtg ggggcaaggg
781 gctctttgat gatgaggacg aggagagtga cctcttcacg gaagcccccc aggatcggca
841 agctggagcc tctgttaagg aggagtcttc atcatccaaa cctggaaaga aaatcccagc
901 aggagctgtt tctgtatttt taggagacac ggatgtgttt ggtgctgcct ccgttccatc
961 aatgaaggag ccacagaagc ctgagcagcc cactccaagg aaaagcccct atgagccccc
1021 tcccactggc ctctttgatg atgatgatgg tgatgatgat gacgactttt tctcggcacc
1081 ccacagcaaa ccttctaaaa caggcaaagt ccaatccact gccgatatct ttggtgacga
1141 agaaggagat ctgttcaaag aaaaagccgt agcatcgcca gaagccactg tgagtcagac
1201 agatgaaaat aaagcaagag cagaaaaaaa ggttacctta tcttccagca aaaatctcaa
1261 gccctcatca gaaacaaaga ctcaaaaagg cttattttca gatgaggagg actctgagga
1321 tttgttttct tctcaaagtg cgagtaagtt aaaaggtgcg tctctgctgc ctggcaagct
1381 ccccacgttg gtttccctgt ttgatgatga agatgaagag gataatcttt ttgggggtac
1441 agctgctaag aagcagacat tgtgtctaca agctcagaga gaagagaaag caaaagcctc
1501 cgagctctcc aaaaagaaag catctgccct gttgttcagc agtgatgagg aggaccagtg
1561 gaatattcct gcttcacaga cccacttagc atctgacagc aggtctaaag gagaacccag
1621 ggattctggg accctccaga gccaggaggc caaggctgtg aaaaagacca gtctctttga
1681 ggaagacgaa gaagatgatc tttttgccat tgccaaggac agccaaaaga agacccagag
1741 agtgtcactc ctctttgaag acgatgttga tagcggaggc tctctgtttg gctctcctcc
1801 cacatctgtt cctcctgcaa caaagaaaaa agagactgtc tctgaggcac cacctttgct
1861 gttcagcgat gaagaagaga aggaggcaca acttggagtg aagtctgtgg ataagaaggt
1921 tgagagtgcc aaggagtcat taaaatttgg gagaactgat gtggctgagt cagaaaagga
1981 aggacttttg actagatctg ctcaggaaac agtcaagcat tctgatttat tttcttcatc
2041 atccccatgg gacaaaggaa ccaagcctag aaccaaaact gttcttagct tgtttgatga
2101 ggaagaggat aaaatggaag atcaaaacac tatccaggct ccacagaaag aagtaggaaa
2161 gggccgcgat cctgatgccc accccaagag cacaggtgtc ttccaggatg aagagctgct
2221 tttcagccac aagctccaaa aggacaatga cccagatgtt gacctttttg ctggcaccaa
2281 aaaaaccaag ctgttagagc caagtgttgg gagcctgttt ggggatgatg aagatgatga
2341 tcttttcagc tctgccaagt cccagccttt ggtacaagag aaaaagagag tagtgaaaaa
2401 agaccactct gttgactctt tcaaaaacca gaaacatcct gaatccattc aaggtagtaa
2461 agaaaaaggc atatggaagc cggaaacacc tcaggcaaat ttagcgatca acccagcggc
2521 cttgctgccc acagcggctt cccagatctc tgaagtaaag cctgttttgc cagaattggc
2581 ttttccttca tctgaacaca gaaggagcca cggtctggaa agtgtgcctg tccttcccgg
2641 gagtggggag gccggtgtga gttttgatct tccagctcag gcagacacct tacacagtgc
2701 aaacaagagc cgtgtcaaga tgagagggaa gcgtagaccg cagacccgtg cagctaggcg
2761 gctggctgct caggagtcca gcgagactga ggacatgagc gtccccagag gacccattgc
2821 acagtgggct gatggcgcca tttccccaaa tggccatcgg ccacagctca gagcagccag
2881 tggagaagac agcactgagg aggccctggc agctgccgct gcaccttggg aaggtggtcc
2941 tgtgcctgga gtggacagaa gcccctttgc aaagtctctg ggtcattcca gaggggaggc
3001 tgaccttttt gattctgggg acatcttttc cacgggcact ggatctcagt ctgtggagag
3061 aacaaaaccc aaggcaaaga tagcagagaa tcctgccaac ccaccagtgg gtggtaaagc
3121 aaagagcccc atgtttcctg ctctaggtga ggccagcagt gatgatgatc tctttcagtc
3181 tgctaaacca aaaccagcaa agaaaacaaa tccctttcct ctcctggaag atgaggatga
3241 cctctttaca gatcagaaag tcaagaagaa tgagacaaaa tccaatagtc agcaggatgt
3301 catattaaca acacaagata tttttgagga tgatatattt gctacggaag caattaaacc
3361 ctctcagaaa accagagaga aggagaaaac attggaatct aatttatttg atgataacat
3421 tgatatcttt gctgacttaa ctgtaaaacc aaaagaaaag tccaaaaaga aagtggaagc
3481 caagtctata tttgatgatg atatggatga catcttctcc tctggtatcc aggctaagac
3541 aaccaaacca aaaagccgat ctgcacaggc cgcacctgaa ccaagatttg aacacaaggt
3601 gtccaacatc tttgatgatc ccctgaatgc ctttggaggc cagtagagca cacagggtat
3661 ccacatgtta ccctgcagct acattgttga gttagtgatg atgttgtata tgctgatggt
3721 cttaactgga ttacaaaaag caaatactag aacagctagc tcatcgttca cccaatgtac
3781 ttggtatttt tctgcactgg tttaatcatg cttaatacta caaaacaaaa ataaatattt
3841 cacagtggtt ggtttgtttt gtttttaaac cacagtttga tttagttagc cttgctgggg
3901 ccataatatg cttcagggtg tgtaaaagaa gaaatctctt tgtggctttc atgggcaggg
3961 aatcccagag atagcaaatg ccacctgacc agaagtcttt gttatatgga tgggaaccct
4021 aacttagggc ctgggcaggg gaaagagaaa gaaggtgaga gattatactt catgagtctt
4081 agcaatatgg gagcaggttt tcactgaatt ctgagggtgc ctctgcatgt cctccaaggc
4141 aaagtttggc aaactgtggc ccccccactg tcatattttg ttaataaaat tttattggaa
4201 cacaaaaaaa aaaaaaaaa
//