LOCUS BC075792 3984 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 25, mRNA (cDNA clone
MGC:87147 IMAGE:30346400), complete cds.
ACCESSION BC075792
VERSION BC075792.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3984)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3984)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: o Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50312665.
FEATURES Location/Qualifiers
source 1..3984
/db_xref="H-InvDB:HIT000265607"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87147 IMAGE:30346400"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3984
/gene="USP25"
/gene_synonym="USP21"
/db_xref="GeneID:29761"
/db_xref="HGNC:HGNC:12624"
/db_xref="MIM:604736"
CDS 371..3538
/gene="USP25"
/gene_synonym="USP21"
/codon_start=1
/product="ubiquitin specific peptidase 25"
/protein_id="AAH75792.1"
/db_xref="GeneID:29761"
/db_xref="HGNC:HGNC:12624"
/db_xref="MIM:604736"
/translation="MTVEQNVLQQSAAQKHQQTFLNQLREITGINDTQILQQALKDSN
GNLELAVAFLTAKNAKTPQQEETTYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDL
QRAIALSLAESNRAFRETGITDEEQAISRVLEASIAENKACLKRTPTEVWRDSRNPYD
RKRQDKAPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNYKPPSNAQDLPRNQKEHRN
LPFMRELRYLFALLVGTKRKYVDPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLED
AFQMKAEEETDEEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLH
ECLEAAMIEGEIESLHSENSGKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNK
LEFPQVLYLDRYMHRNREITRIKREEIKRLKDYLTVLQQRLERYLSYGSGPKRFPLVD
VLQYALEFASSKPVCTSPVDDIDASSPPSGSIPSQTLPSTTEQQGALSSELPSTSPSS
VAAISSRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLESCLHRWRTEIENDTRDL
QESISRIHRTIELMYSDKSMIQVPYRLHAVLVHEGQANAGHYWAYIFDHRESRWMKYN
DIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKAQFLIQEEFNKETGQPLVGIETLP
PDLRDFVEEDNQRFEKELEEWDAQLAQKALQEKLLASQKLRESETSVTTAQAAGDPEY
LEQPSRSDFSKHLKEETIQIITKASHEHEDKSPETVLQSAIKLEYARLVKLAQEDTPP
ETDYRLHHVVVYFIQNQAPKKIIEKTLLEQFGDRNLSFDERCHNIMKVAQAKLEMIKP
EEVNLEEYEEWHQDYRKFRETTMYLIIGLENFQRESYIDSLLFLICAYQNNKELLSKG
LYRGHDEELISHYRRECLLKLNEQAAELFESGEDREVNNGLIIMNEFIVPFLPLLLVD
EMEEKDILAVEDMRNRWCSYLGQEMEPHLQEKLTDFLPKLLDCSMEIKSFHEPPKLPS
YSTHELCERFARIMLSLSRTPADGR"
BASE COUNT 1257 a 818 c 906 g 1003 t
ORIGIN
1 taagcagccc gcggaccggc agcaaaggaa cgtgcgaacg cgtgacgccg cccgactggc
61 tcgcgctctc ccgtgccccg gcgtcctccg cccgctcatg gcccgggccg ccgcggacga
121 gcggcgctga ggcgggccgc gtggagacgt gaggcggccg ccgtggccct cacagtcggc
181 gtttcgccgc ctgcccgcgg tgcccgcgca cgccggccgc catcgccttc gcgcctggct
241 ggcgggggcg ctgtcctccc aggccgtccg cgccgctccc tggagctcgg cggagcgcgg
301 cagccagggc cggcggaggc gcgaggagcc gggcgccacc gccgccgccg ccgccgccgc
361 cgcgggggcc atgaccgtgg agcagaacgt gctgcagcag agcgcggcgc agaagcacca
421 gcagacgttt ttgaatcaac tgagagaaat tacggggatt aatgacaccc agatactaca
481 gcaagccttg aaggatagta atggaaactt ggaattagca gtggctttcc ttactgcgaa
541 gaatgctaag acccctcagc aggaggagac aacttactac caaacagcac ttcctggcaa
601 tgatagatac atcagtgtgg gaagccaagc agatacaaat gtgattgatc tcactggaga
661 tgataaagat gatcttcaga gagcaattgc cttgagtttg gccgaatcaa acagggcatt
721 cagggagact ggaataactg atgaggaaca agccattagc agagttcttg aagccagcat
781 agcagagaat aaagcatgtt tgaagaggac acctacagaa gtttggaggg attctcgaaa
841 cccttatgat agaaaaagac aggacaaagc tcccgttggg ctaaagaatg ttggcaatac
901 ttgttggttt agtgctgtta ttcagtcatt atttaatctt ttggaattta gaagattagt
961 tctgaattac aagcctccat caaatgctca agatttaccc cgaaaccaaa aggaacatcg
1021 gaatttgcct tttatgcgtg agctgaggta tctatttgca cttcttgttg gtaccaaaag
1081 gaagtatgtt gatccatcaa gagcagttga aattcttaag gatgctttca aatcaaatga
1141 ctcacagcag caagatgtga gtgagtttac acacaaatta ttagattggt tagaagatgc
1201 cttccaaatg aaagctgaag aggagacgga tgaagagaag ccaaagaacc ccatggtaga
1261 gttgttctat ggcagattcc tggctgtggg agtacttgaa ggtaaaaaat ttgaaaacac
1321 tgaaatgttt ggtcagtacc cacttcaggt caatgggttc aaagatctgc atgagtgcct
1381 agaagctgca atgattgaag gagaaattga gtctttacat tcagagaatt caggaaaatc
1441 aggccaagag cattggttta ctgaattacc acctgtgtta acatttgaat tgtcaagatt
1501 tgaatttaat caggcattgg gaagaccaga aaaaattcac aacaaattag aatttcccca
1561 agttttatat ttggacagat acatgcacag aaacagagaa ataacaagaa ttaagaggga
1621 agagatcaag agactgaaag attacctcac ggtattacaa caaaggctag aaagatattt
1681 aagctatggt tccggtccca aacgattccc cttggtagat gttcttcagt atgcattgga
1741 atttgcctca agtaaacctg tttgcacttc tcctgttgac gatattgacg ctagttcccc
1801 acctagtggt tccataccat cacagacatt accaagcaca acagaacaac agggagccct
1861 atcttcagaa ctgccaagca catcaccttc atcagttgct gccatttcat cgagatcagt
1921 aatacacaaa ccatttactc agtcccggat acctccagat ttgcccatgc atccggcacc
1981 aaggcacata acggaggaag aactttctgt gctggaaagt tgtttacatc gctggaggac
2041 agaaatagaa aatgacacca gagatttgca ggaaagcata tccagaatcc atcgaacaat
2101 tgaattaatg tactctgaca aatctatgat acaagttcct tatcgattac atgccgtttt
2161 agttcacgaa ggccaagcta atgctgggca ctactgggca tatatttttg atcatcgtga
2221 aagcagatgg atgaagtaca atgatattgc tgtgacaaaa tcatcatggg aagagctagt
2281 gagggactct tttggtggtt atagaaatgc cagtgcatac tgtttaatgt acataaatga
2341 taaggcacag ttcctaatac aagaggagtt taataaagaa actgggcagc cccttgttgg
2401 tatagaaaca ttaccaccgg atttgagaga ttttgttgag gaagacaacc aacgatttga
2461 aaaagaacta gaagaatggg atgcacaact tgcccagaaa gctttgcagg aaaagctttt
2521 agcgtctcag aaattgagag agtcagagac ttctgtgaca acagcacaag cagcaggaga
2581 cccagaatat ctagagcagc catcaagaag tgatttctca aagcacttga aagaagaaac
2641 tattcaaata attaccaagg catcacatga gcatgaagat aaaagtcctg aaacagtttt
2701 gcagtcggca attaagttgg aatatgcaag gttggttaag ttggcccaag aagacacccc
2761 accagaaacc gattatcgtt tacatcatgt agtggtctac tttatccaga accaggcacc
2821 aaagaaaatt attgagaaaa cattactaga acaatttgga gatagaaatt tgagttttga
2881 tgaaaggtgt cacaacataa tgaaagttgc tcaagccaaa ctggaaatga taaaacctga
2941 agaagtaaac ttggaggaat atgaggagtg gcatcaggat tataggaaat tcagggaaac
3001 aactatgtat ctcataattg ggctagaaaa ttttcaaaga gaaagttata tagattcctt
3061 gctgttcctc atctgtgctt atcagaataa caaagaactc ttgtctaaag gcttatacag
3121 aggacatgat gaagaattga tatcacatta tagaagagaa tgtttgctaa aattaaatga
3181 gcaagccgca gaactcttcg aatctggaga ggatcgagaa gtaaacaatg gtttgattat
3241 catgaatgag tttattgtcc catttttgcc attattactg gtggatgaaa tggaagaaaa
3301 ggatatacta gctgtagaag atatgagaaa tcgatggtgt tcctaccttg gtcaagaaat
3361 ggaaccacac ctccaagaaa agctgacaga ttttttgcca aaactgcttg attgttctat
3421 ggagattaaa agtttccatg agccaccgaa gttaccttca tattccacgc atgaactctg
3481 tgagcgattt gcccgaatca tgttgtccct cagtcgaact cctgctgatg gaagataaac
3541 tgcacacttt ccctgaacac actgtataaa ctctttttag ttcttaaccc ttgccttcct
3601 gtcacagggt ttgcttgttg ctgctatagt ttttaacttt tttttatttt aataactgca
3661 aaagacaaaa tgactataca gactttagtc agactgcaga caataaagct gaaaatcgca
3721 tggcgctcag acattttaac cggaactgat gtataatcac aaatctaatt gattttatta
3781 tggcaaaact atgcttttgc caccttcctg ttgcagtatt actttgcttt tatcttttct
3841 ttctcaacag ctttccattc agtctggatc cttccatgac tacagccatt taagtgttca
3901 gcactgtgta cgatacataa tatttggtag cttgtaaatg aaataaagaa taaagtttta
3961 tttatggcta aaaaaaaaaa aaaa
//