LOCUS BC075066 1805 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synapsin III, mRNA (cDNA clone MGC:103970
IMAGE:30915375), complete cds.
ACCESSION BC075066
VERSION BC075066.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1805)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1805)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 4, 2004 this sequence version replaced BC075066.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
Center
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBU Plate: 3 Row: B Column: 4.
FEATURES Location/Qualifiers
source 1..1805
/db_xref="H-InvDB:HIT000265573"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:103970 IMAGE:30915375"
/tissue_type="Brain, PCR rescued clones"
/clone_lib="NIH_MGC_264"
/lab_host="DH10B"
/note="Vector: pCR4 Topo TA"
gene 1..1805
/gene="SYN3"
/db_xref="GeneID:8224"
/db_xref="HGNC:HGNC:11496"
/db_xref="MIM:602705"
CDS 27..1769
/gene="SYN3"
/codon_start=1
/product="synapsin III"
/protein_id="AAH75066.1"
/db_xref="GeneID:8224"
/db_xref="HGNC:HGNC:11496"
/db_xref="MIM:602705"
/translation="MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRH
PQPLAASFSSPGSSLFSSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHT
DWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFKPD
FILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSL
GPEKFPLVEQTFFPNHKPMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAM
AKTYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRL
WVDSCSEMFGGLDICAVKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSK
MSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQP
QRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLAS
QPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEAKAET
IRNLRKSFASLFSD"
BASE COUNT 422 a 596 c 455 g 332 t
ORIGIN
1 ccagtcatct ccatccatcc acagccatga atttcctccg gcgacgtctc tctgacagca
61 gcttcatggc caacctgcct aatggctata tgacggacct gcaacgccca gatagctcca
121 ccagctcacc tgcttccccc gccatggaga ggaggcaccc ccagcccctg gctgcctcct
181 tctcctctcc aggatccagc ctttttagct ccctctccag tgccatgaag caggcccctc
241 aggccacctc aggactgatg gagcctccag gtccctccac gcccattgtt caaagaccca
301 ggatcctgtt ggtgatcgat gatgcccata cagactggtc gaagtatttc catgggaaga
361 aggtgaatgg agagattgag atccgagtgg agcaggctga attctcagag ttgaacctag
421 ctgcctatgt gaccgggggc tgcatggtgg acatgcaggt cgtgagaaat gggaccaaag
481 tggtgagcag atccttcaag ccagacttca tcctggtccg ccagcatgcc tacagcatgg
541 ccctggggga agactaccgc agcctggtca tcggcctgca gtatggaggg ctgcctgctg
601 tcaactctct ctactccgtc tacaacttct gcagcaagcc ctgggtgttc tctcagctca
661 ttaagatctt ccattccctg ggtcctgaga agttcccgct tgtggagcaa acatttttcc
721 ccaaccataa gccaatggtc acagccccac acttcccggt ggtagtcaag ctgggacatg
781 cccacgctgg aatgggaaag atcaaagtgg aaaaccagct tgacttccag gacatcacca
841 gcgtggtcgc catggccaaa acctacgcca ccaccgaggc cttcatcgac tccaagtacg
901 acatccgcat ccagaaaatt ggatccaact acaaggctta catgagaacc tccatctctg
961 ggaactggaa ggccaacaca ggctctgcca tgctggagca ggtggccatg acagagaggt
1021 acaggctgtg ggtggacagc tgctcggaaa tgtttggcgg cctggacatc tgtgccgtca
1081 aggctgtcca cagcaaggat ggcagagatt acatcatcga ggtaatggac agctcaatgc
1141 cgctgattgg agagcatgtg gaagaggaca gacagctgat ggccgacctt gttgtctcca
1201 aaatgagcca gctcccgatg ccaggaggca cagcgccctc ccccctcaga ccttgggctc
1261 cacagattaa atcagcgaaa tccccagggc aagcccagct ggggcctcag ctaggccagc
1321 cccagccacg cccacctccg caaggaggcc ctcgccaagc tcagtctcct cagccccaga
1381 gatctggaag cccctcccaa cagaggctct ccccacaagg ccagcagccc ctgagccccc
1441 agtccggatc tccacagcag caaaggtcac caggctctcc gcagctatcc cgggcatcca
1501 gtggcagctc cccaaaccag gcctccaagc caggtgccac cctcgcctca cagccccggc
1561 cccctgtgca gggccgtagt acctcccagc agggtgaaga gtccaagaag ccagcaccac
1621 cccatccgca tctcaacaaa tctcagtccc tgactaacag cctcagcaca tccgacacct
1681 cccagcgtgg gaccccaagt gaagacgagg ccaaggctga aaccatccgc aacctgagga
1741 agtcttttgc cagcctgttc tctgactaac gccatccagg ctgggagggg aagagtgctc
1801 tgcta
//