LOCUS BC075039 1569 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens neuro-oncological ventral antigen 1, mRNA (cDNA clone
MGC:104118 IMAGE:30915572), complete cds.
ACCESSION BC075039
VERSION BC075039.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1569)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1569)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 4, 2004 this sequence version replaced BC075039.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
Center
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBU Plate: 5 Row: B Column: 9.
FEATURES Location/Qualifiers
source 1..1569
/db_xref="H-InvDB:HIT000265546"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104118 IMAGE:30915572"
/tissue_type="Brain, PCR rescued clones"
/clone_lib="NIH_MGC_272"
/lab_host="DH10B"
/note="Vector: pCR4 Topo TA with reversed insert"
gene 1..1569
/gene="NOVA1"
/gene_synonym="Nova-1"
/db_xref="GeneID:4857"
/db_xref="HGNC:HGNC:7886"
/db_xref="MIM:602157"
CDS 25..1548
/gene="NOVA1"
/gene_synonym="Nova-1"
/codon_start=1
/product="neuro-oncological ventral antigen 1"
/protein_id="AAH75039.1"
/db_xref="GeneID:4857"
/db_xref="HGNC:HGNC:7886"
/db_xref="MIM:602157"
/translation="MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNT
GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLI
QGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKS
SPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQE
RVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTA
EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGL
GLSQAAATGALAAAAASANPAAAAANLLATYASEASASGSTAGGTAGTFALGSLAAAT
AATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQEL
TGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQGVRAANPQKVG"
BASE COUNT 461 a 388 c 389 g 331 t
ORIGIN
1 gtagcagcgg caggaactgc aaacatgatg gcggcagctc ccatccagca gaacgggacc
61 cacactgggg ttcccataga cctggacccg ccggactcgc ggaaaaggcc gctggaagcc
121 ccccctgaag ccggcagcac caagaggacc aatacgggcg aagacggcca gtattttcta
181 aaggttctca tacctagtta tgctgctgga tctataattg ggaagggagg acagacaatt
241 gttcagttgc aaaaagaaac tggagccacc atcaagctgt ctaagtccaa agatttttac
301 ccaggtacta ctgagcgagt gtgcttgatc cagggaacgg ttgaagcact gaatgcagtt
361 catggattca ttgcagaaaa aattcgagaa atgccccaaa atgtggccaa gacagaacca
421 gtcagcattc tacaacccca gaccaccgtt aatccagatc gcatcaaaca aacattgcca
481 tcttccccaa ctaccaccaa gtcctctcca tctgatccca tgaccacctc cagagctaat
541 caggtaaaga ttatagttcc caacagcaca gcaggtctga taatagggaa gggaggtgct
601 actgtgaagg ctgtaatgga gcagtcaggg gcttgggtgc agctttccca gaaacctgat
661 gggatcaact tgcaagagag ggttgtcact gtgagtggag aacctgaaca aaaccgaaaa
721 gctgttgaac ttatcatcca gaagatacaa gaggatccac aaagtggcag ctgtctcaat
781 atcagttatg ccaatgtgac aggtccagtg gcaaattcca atccaaccgg atctccttat
841 gcaaacactg ctgaagtgtt accaactgct gcagcagctg cagggctatt aggacatgct
901 aaccttgctg gcgttgcagc ctttccagca gttttatctg gcttcacagg caatgacctg
961 gtggccatca cctctgcact taatacatta gccagctatg gatataatct caacacttta
1021 ggtttaggtc tcagtcaagc agcagcaaca ggggctttgg ctgcagcagc tgccagtgcc
1081 aacccagcag cagcagcagc caatttattg gccacctatg ccagtgaagc ctcagccagt
1141 ggcagcacag ctggtggtac ggcggggaca tttgcattag gtagcctggc tgctgctact
1201 gctgcaacca atggatattt tggagctgct tctcccctag ctgccagtgc cattctagga
1261 acagaaaagt ccacagatgg atccaaggat gtagttgaaa tagcagtgcc agaaaactta
1321 gttggtgcaa tacttggcaa aggagggaaa acattagtgg aataccagga gttgactggt
1381 gcaaggatac agatctccaa aaaaggagaa ttcgtacctg gcacaaggaa tcggaaggta
1441 accattactg gaacaccagc tgcaacacag gctgctcaat atttaattac acaaaggatc
1501 acatatgagc aaggagttcg ggctgccaat cctcagaaag tgggttgagt gccccagtta
1561 cacatcaga
//