LOCUS BC075038 1568 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens neuro-oncological ventral antigen 1, mRNA (cDNA clone
MGC:103957 IMAGE:30915356), complete cds.
ACCESSION BC075038
VERSION BC075038.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1568)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1568)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 4, 2004 this sequence version replaced BC075038.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
Center
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBU Plate: 2 Row: H Column: 9.
FEATURES Location/Qualifiers
source 1..1568
/db_xref="H-InvDB:HIT000265545"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:103957 IMAGE:30915356"
/tissue_type="Brain, PCR rescued clones"
/clone_lib="NIH_MGC_272"
/lab_host="DH10B"
/note="Vector: pCR4 Topo TA with reversed insert"
gene 1..1568
/gene="NOVA1"
/gene_synonym="Nova-1"
/db_xref="GeneID:4857"
/db_xref="HGNC:HGNC:7886"
/db_xref="MIM:602157"
CDS 24..1547
/gene="NOVA1"
/gene_synonym="Nova-1"
/codon_start=1
/product="neuro-oncological ventral antigen 1"
/protein_id="AAH75038.1"
/db_xref="GeneID:4857"
/db_xref="HGNC:HGNC:7886"
/db_xref="MIM:602157"
/translation="MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNT
GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLI
QGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKS
SPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQE
RVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTA
EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGL
GLSQAAATGALAAAAASANPAAAAANLLATYASEASASGSTAGGTAGTFALGSLAAAT
AATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQEL
TGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQGVRAANPQKVG"
BASE COUNT 461 a 387 c 389 g 331 t
ORIGIN
1 gtagcagggc aggaactgca aacatgatgg cggcagctcc catccagcag aacgggaccc
61 acactggggt tcccatagac ctggacccgc cggactcgcg gaaaaggccg ctggaagccc
121 cccctgaagc cggcagcacc aagaggacca atacgggcga agacggccag tattttctaa
181 aggttctcat acctagttat gctgctggat ctataattgg gaagggagga cagacaattg
241 ttcagttgca aaaagaaact ggagccacca tcaagctgtc taagtccaaa gatttttacc
301 caggtactac tgagcgagtg tgcttgatcc agggaacggt tgaagcactg aatgcagttc
361 atggattcat tgcagaaaaa attcgagaaa tgccccaaaa tgtggccaag acagaaccag
421 tcagcattct acaaccccag accaccgtta atccagatcg catcaaacaa acattgccat
481 cttccccaac taccaccaag tcctctccat ctgatcccat gaccacctcc agagctaatc
541 aggtaaagat tatagttccc aacagcacag caggtctgat aatagggaag ggaggtgcta
601 ctgtgaaggc tgtaatggag cagtcagggg cttgggtgca gctttcccag aaacctgatg
661 ggatcaactt gcaagagagg gttgtcactg tgagtggaga acctgaacaa aaccgaaaag
721 ctgttgaact tatcatccag aagatacaag aggatccaca aagtggcagc tgtctcaata
781 tcagttatgc caatgtgaca ggtccagtgg caaattccaa tccaaccgga tctccttatg
841 caaacactgc tgaagtgtta ccaactgctg cagcagctgc agggctatta ggacatgcta
901 accttgctgg cgttgcagcc tttccagcag ttttatctgg cttcacaggc aatgacctgg
961 tggccatcac ctctgcactt aatacattag ccagctatgg atataatctc aacactttag
1021 gtttaggtct cagtcaagca gcagcaacag gggctttggc tgcagcagct gccagtgcca
1081 acccagcagc agcagcagcc aatttattgg ccacctatgc cagtgaagcc tcagccagtg
1141 gcagcacagc tggtggtacg gcggggacat ttgcattagg tagcctggct gctgctactg
1201 ctgcaaccaa tggatatttt ggagctgctt ctcccctagc tgccagtgcc attctaggaa
1261 cagaaaagtc cacagatgga tccaaggatg tagttgaaat agcagtgcca gaaaacttag
1321 ttggtgcaat acttggcaaa ggagggaaaa cattagtgga ataccaggag ttgactggtg
1381 caaggataca gatctccaaa aaaggagaat tcgtacctgg cacaaggaat cggaaggtaa
1441 ccattactgg aacaccagct gcaacacagg ctgctcaata tttaattaca caaaggatca
1501 catatgagca aggagttcgg gctgccaatc ctcagaaagt gggttgagtg ccccagttac
1561 acatcaga
//