LOCUS BC075020 1436 bp mRNA linear HUM 08-MAR-2005 DEFINITION Homo sapiens tripartite motif-containing 49, mRNA (cDNA clone MGC:104159 IMAGE:30915620), complete cds. ACCESSION BC075020 VERSION BC075020.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1436) AUTHORS Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1436) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 4, 2004 this sequence version replaced BC075020.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Genome Sequence Centre, British Columbia Cancer Center cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRBU Plate: 5 Row: F Column: 9. FEATURES Location/Qualifiers source 1..1436 /db_xref="H-InvDB:HIT000265527" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:104159 IMAGE:30915620" /tissue_type="Pooled tissue, PCR rescued clones" /clone_lib="NIH_MGC_245" /note="Vector: pCR4 Topo TA" gene 1..1436 /gene="TRIM49" /gene_synonym="RNF18" /db_xref="GeneID:57093" /db_xref="MIM:606124" CDS 29..1387 /gene="TRIM49" /gene_synonym="RNF18" /codon_start=1 /product="ring finger protein 18" /protein_id="AAH75020.1" /db_xref="GeneID:57093" /db_xref="MIM:606124" /translation="MNSGILQVFQGELICPLCMNYFIDPVTIDCGHSFCRPCFYLNWQ DIPFLVQCSECTKSTEQINLKTNIHLKKMASLARKVSLWLFLSSEEQMCGTHRETKKI FCEVDRSLLCLLCSSSQEHRYHRHRPIEWAAEEHREKLLQKMQSLWEKACENHRNLNV ETTRTRCWKDYVNLRLEAIRAEYQKMPAFHHEEEKHNLEMLKKKGKEIFHRLHLSKAK MAHRMEILRGMYEELNEMCHKPDVELLQAFGDILHRSESVLLHMPQPLNPELSAGPIT GLRDRLNQFRVHITLHHEEANSDIFLYEILRSMCIGCDHQDVPYFTATPRSFLAWGVQ TFTSGKYYWEVHVGDSWNWAFGVCNMYRKEKNQNEKIDGKAGLFLLGCVKNDIQCSLF TTSPLMLQYIPKPTSRVGLFLDCEAKTVSFVDVNQSSLIYTIPNCSFSPPLRPIFCCI HF" BASE COUNT 420 a 307 c 334 g 375 t ORIGIN 1 gggaaccatt aaaagaactc caggaaacat gaattctgga atcttacagg tctttcaggg 61 ggaactcatc tgccccctgt gcatgaacta cttcatagac ccggtcacca tagactgtgg 121 gcacagcttt tgcaggcctt gtttctacct caactggcaa gacatcccat ttcttgtcca 181 gtgctctgaa tgcacaaagt caacagagca gataaacctc aaaaccaaca ttcatttgaa 241 gaagatggct tctcttgcca gaaaagtcag tctctggcta ttcctgagct ctgaggagca 301 aatgtgtggc actcacaggg agacaaagaa gatattctgt gaagtggaca ggagcctgct 361 ctgtttgctg tgctccagct ctcaggagca ccggtatcac agacaccgtc ccattgagtg 421 ggctgctgag gaacaccggg agaagctttt acagaaaatg cagtctttgt gggaaaaagc 481 ttgtgaaaat cacagaaacc tgaatgtgga aaccaccaga accagatgct ggaaggatta 541 tgtgaattta aggctagaag caattagagc tgagtatcag aagatgcctg catttcatca 601 tgaagaagaa aaacataatt tggagatgct gaaaaagaag gggaaagaaa tttttcatcg 661 acttcattta agtaaagcca aaatggctca taggatggag attttaagag gaatgtatga 721 ggagctgaac gaaatgtgcc ataaaccaga tgtggagcta cttcaggctt ttggagacat 781 attacacagg agtgagtccg tgctgctgca catgccccag cctctgaatc cagagctcag 841 tgcagggccc atcactggac tgagggacag gctcaaccaa ttccgagtgc atattactct 901 gcatcatgaa gaagccaaca gtgatatctt tctgtatgaa attttgagaa gcatgtgtat 961 tggatgtgac catcaagatg taccctattt cactgcaaca cctagaagtt ttcttgcatg 1021 gggtgttcag actttcacct cgggcaaata ttactgggag gtccatgtag gggactcctg 1081 gaattgggct tttggtgtct gtaatatgta tcggaaagag aagaatcaga atgagaagat 1141 agatggaaag gcgggactct ttcttcttgg gtgtgttaag aatgacattc aatgcagtct 1201 ctttaccacc tccccactta tgctgcaata tatcccaaaa cctaccagcc gagtaggatt 1261 attcctggat tgtgaggcta agactgtgag ctttgttgat gttaatcaaa gctccctaat 1321 atacaccatc cctaattgct ctttctcacc tcctctcagg cctatctttt gctgtattca 1381 cttctgacca gagacaaatc agaaatgtgt tcacatgctg tgggaacccc tttatc //