LOCUS BC074993 829 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens paired related homeobox 1, mRNA (cDNA clone MGC:103918 IMAGE:30915308), complete cds. ACCESSION BC074993 VERSION BC074993.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 829) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 829) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 4, 2004 this sequence version replaced BC074993.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Genome Sequence Centre, British Columbia Cancer Center cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRBU Plate: 2 Row: D Column: 9. FEATURES Location/Qualifiers source 1..829 /db_xref="H-InvDB:HIT000265500" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:103918 IMAGE:30915308" /tissue_type="Pooled tissue, PCR rescued clones" /clone_lib="NIH_MGC_271" /note="Vector: pCR4 Topo TA with reversed insert" gene 1..829 /gene="PRRX1" /gene_synonym="PHOX1" /gene_synonym="PRX1" /db_xref="GeneID:5396" /db_xref="HGNC:HGNC:9142" /db_xref="MIM:167420" CDS 48..785 /gene="PRRX1" /gene_synonym="PHOX1" /gene_synonym="PRX1" /codon_start=1 /product="paired related homeobox 1" /protein_id="AAH74993.1" /db_xref="GeneID:5396" /db_xref="HGNC:HGNC:9142" /db_xref="MIM:167420" /translation="MTSSYGHVLERQPALGGRLDSPGNLDTLQAKKNFSVSHLLDLEE AGDMVAAQADENVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFN SSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANK NASLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYSAMATYSATCANNSPAQGI NMANSIANLRLKAKEYSLQRNQVPTVN" BASE COUNT 227 a 224 c 245 g 133 t ORIGIN 1 tgattcgagc gggaagaggg gggtggttgg gatcggtggg ggagaccatg acctccagct 61 acgggcacgt tctggagcgg caaccggcgc tgggcggccg cttggacagc ccgggcaacc 121 tcgacaccct gcaggcgaaa aagaacttct ccgtcagtca cctgctagac ctggaggaag 181 ccggggacat ggtggcggca caggcggatg agaacgtggg cgaggctggc cggagcctgc 241 tggagtcgcc gggactcacc agcggcagcg acaccccgca gcaggacaat gaccagctga 301 actcagaaga aaaaaagaag agaaagcagc gaaggaatag gacaaccttc aatagcagcc 361 agctgcaggc tttggagcgt gtctttgagc ggacacacta tcctgatgct tttgtgcgag 421 aagaccttgc ccgccgggtg aacctcaccg aggcgagagt gcaggtgtgg tttcagaacc 481 gaagagccaa gttccgcagg aatgagagag ccatgctagc caataaaaac gcttccctcc 541 tcaaatccta ctcaggagac gtgactgctg tggagcagcc catcgtacct cgtcctgctc 601 cgagacccac cgattatctc tcctggggga cagcgtctcc gtacagcgcc atggctactt 661 attctgccac atgtgccaac aatagccctg cacagggcat caacatggcc aacagcattg 721 ccaacctgag actgaaggcc aaggaatata gtttacagag gaaccaggtg ccaacagtca 781 actgaggaaa aaaaataatt aaacaggcct aagaagaaat caaaaacca //