LOCUS BC074967 724 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens C-type lectin domain family 4, member C, mRNA (cDNA
clone MGC:103902 IMAGE:30915289), complete cds.
ACCESSION BC074967
VERSION BC074967.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 724)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 724)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 4, 2004 this sequence version replaced BC074967.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
Center
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBU Plate: 2 Row: C Column: 2.
FEATURES Location/Qualifiers
source 1..724
/db_xref="H-InvDB:HIT000265474"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:103902 IMAGE:30915289"
/tissue_type="Pooled tissue, PCR rescued clones"
/clone_lib="NIH_MGC_271"
/note="Vector: pCR4 Topo TA with reversed insert"
gene 1..724
/gene="CLEC4C"
/gene_synonym="BDCA2"
/gene_synonym="CD303"
/gene_synonym="DLEC"
/gene_synonym="HECL"
/gene_synonym="PRO34150"
/db_xref="GeneID:170482"
/db_xref="HGNC:HGNC:13258"
/db_xref="MIM:606677"
CDS 45..686
/gene="CLEC4C"
/gene_synonym="BDCA2"
/gene_synonym="CD303"
/gene_synonym="DLEC"
/gene_synonym="HECL"
/gene_synonym="PRO34150"
/codon_start=1
/product="C-type lectin domain family 4, member C"
/protein_id="AAH74967.1"
/db_xref="GeneID:170482"
/db_xref="HGNC:HGNC:13258"
/db_xref="MIM:606677"
/translation="MVPEEEPQDREKGLWWFQLKVWSMAVVSILLLSVCFTVSSVVPH
NFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIEDWSCCPTPWTSFQSSCYFISTGMQ
SWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTP
YNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKMKKIYI"
BASE COUNT 203 a 148 c 180 g 193 t
ORIGIN
1 gcacccacct gatagaggaa gtccaaaggg tgtgcgcaca cacaatggtg cctgaagaag
61 agcctcaaga ccgagagaaa ggactctggt ggttccagtt gaaggtctgg tccatggcag
121 tcgtatccat cttgctcctc agtgtctgtt tcactgtgag ttctgtggtg cctcacaatt
181 ttatgtatag caaaactgtc aagaggctgt ccaagttacg agagtatcaa cagtatcatc
241 caagcctgac ctgcgtcatg gaaggaaagg acatagaaga ttggagctgc tgcccaaccc
301 cttggacttc atttcagtct agttgctact ttatttctac tgggatgcaa tcttggacta
361 agagtcaaaa gaactgttct gtgatggggg ctgatctggt ggtgatcaac accagggaag
421 aacaggattt catcattcag aatctgaaaa gaaattcttc ttattttctg gggctgtcag
481 atccaggggg tcggcgacat tggcaatggg ttgaccagac accatacaat gaaaatgtca
541 cattctggca ctcaggtgaa cccaataacc ttgatgagcg ttgtgcgata ataaatttcc
601 gttcttcaga agaatggggc tggaatgaca ttcactgtca tgtacctcag aagtcaattt
661 gcaagatgaa gaagatctac atataaatga aatattctcc ctggaaatgt gtttgggttg
721 gcat
//