LOCUS BC074924 673 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sex determining region Y, mRNA (cDNA clone MGC:104040
IMAGE:30915485), complete cds.
ACCESSION BC074924
VERSION BC074924.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 673)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 673)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 4, 2004 this sequence version replaced BC074924.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
Center
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBU Plate: 4 Row: C Column: 6.
FEATURES Location/Qualifiers
source 1..673
/db_xref="H-InvDB:HIT000265431"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104040 IMAGE:30915485"
/tissue_type="Pooled tissue, PCR rescued clones"
/clone_lib="NIH_MGC_245"
/note="Vector: pCR4 Topo TA"
gene 1..673
/gene="SRY"
/gene_synonym="TDF"
/gene_synonym="TDY"
/db_xref="GeneID:6736"
/db_xref="HGNC:HGNC:11311"
/db_xref="MIM:480000"
CDS 39..653
/gene="SRY"
/gene_synonym="TDF"
/gene_synonym="TDY"
/codon_start=1
/product="sex determining region Y"
/protein_id="AAH74924.1"
/db_xref="GeneID:6736"
/db_xref="HGNC:HGNC:11311"
/db_xref="MIM:480000"
/translation="MQSYASAMLSVFNSDDYSPAVQENIPALRRSSSFLCTESCNSKY
QCETGENSKGNVQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLT
EAEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLPKNCSLLPADPASVLCSEVQLD
NRLYRDDCTKATHSRMEHQLGHLPPINAASSPQQRDRYSHWTKL"
BASE COUNT 199 a 171 c 163 g 140 t
ORIGIN
1 cacctttcaa ttttgtcgca ctctccttgt ttttgacaat gcaatcatat gcttctgcta
61 tgttaagcgt attcaacagc gatgattaca gtccagctgt gcaagagaat attcccgctc
121 tccggagaag ctcttccttc ctttgcactg aaagctgtaa ctctaagtat cagtgtgaaa
181 cgggagaaaa cagtaaaggc aacgtccagg atagagtgaa gcgacccatg aacgcattca
241 tcgtgtggtc tcgcgatcag aggcgcaaga tggctctaga gaatcccaga atgcgaaact
301 cagagatcag caagcagctg ggataccagt ggaaaatgct tactgaagcc gaaaaatggc
361 cattcttcca ggaggcacag aaattacagg ccatgcacag agagaaatac ccgaattata
421 agtatcgacc tcgtcggaag gcgaagatgc tgccgaagaa ttgcagtttg cttcccgcag
481 atcccgcttc ggtactctgc agcgaagtgc aactggacaa caggttgtac agggatgact
541 gtacgaaagc cacacactca agaatggagc accagctagg ccacttaccg cccatcaacg
601 cagccagctc accgcagcaa cgggaccgct acagccactg gacaaagctg taggacaatc
661 gggtaacatt ggc
//