LOCUS BC074850 1311 bp mRNA linear HTC 17-JUL-2007
DEFINITION Homo sapiens iroquois homeobox 5, mRNA (cDNA clone IMAGE:30915566),
with apparent retained intron.
ACCESSION BC074850
VERSION BC074850.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1311)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1311)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jul 26, 2004 this sequence version replaced BC074850.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
Center
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBU Plate: 5 Row: B Column: 3
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1311
/db_xref="H-InvDB:HIT000265357"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30915566"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_273"
/lab_host="DH10B"
/note="Vector: pCR4 Topo TA with reversed insert"
BASE COUNT 255 a 462 c 409 g 185 t
ORIGIN
1 agggaaaagg gtgcttcggt cgttccgatg gcagtggaga ccacggtcca cactcacctc
61 tctgcgtctc caccgcaggg ctctccctac gaccacacac ccggcatggc gggctccttg
121 gggtaccatc cttacgcggc gcccctggga tcgtaccctt acggggaccc agcgtaccgg
181 aagaacgcca caagggacgc cacggctacc ctcaaggcct ggctcaacga gcaccgcaag
241 aacccctacc ccaccaaggg cgagaagatc atgttggcca tcatcaccaa gatgaccctc
301 acccaggtgt ccacctggtt cgccaacgcg cgccggcgcc tcaagaaaga gaataaaatg
361 acgtggacgc cgcggaaccg cagcgaggac gaggaagagg aggagaacat tgacctggag
421 aagaacgacg aggacgagcc ccagaagccc gaggacaagg gcgaccccga gggtcccgaa
481 gcaggaggag ctgagcagaa ggcggcttcg ggctgcgaac ggcttcaggg accacccacc
541 cctgcaggca aggagacgga gggcagcctc agcgactcgg attttaagga gccgccctcg
601 gagggccgcc tcgacgcgct gcagggcccc ccccgcaccg gcgggccctc cccggctggg
661 ccagcggcgg cgcggctggc ggaggacccg gcccctcact accccgccgg agcgccggcg
721 cccggcccgc atccagccgc gggcgaggtg cctccgggtc ccggcgggcc ctcggttatc
781 cattcgccgc ctccgccgcc gcctcctgcg gtgctcgcca agcccaaact gtggtctttg
841 gcagagatcg ccacatcgtc ggacaaggtc aaggacgggg gcggcgggaa cgagggctct
901 ccatgcccac cgtgtcccgg gcccatagcc gggcaagccc taggaggcag ccgggcgtcg
961 ccggccccgg cgccgtcacg ctcgccctcg gcgcagtgtc cttttccagg cgggacggtg
1021 ctgtcccggc ctctctacta caccgcgccc ttctatcccg gctacacgaa ctatggctcc
1081 ttcggacacc ttcatggcca cccggggccc gggccaggcc ccacaaccgg tccggggtct
1141 catttcaatg gattaaacca gaccgtgttg aaccgagcgg acgctttggc taaagacccg
1201 aaaatgttgc ggagccagtc tcagctagac ctgtgcaaag actctcccta tgaattgaag
1261 aaaggtatgt ccgacattta acgcgggctg cgtcggtccc ggacttttct a
//