LOCUS BC074822 772 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens C-type lectin domain family 4, member A, mRNA (cDNA clone MGC:103930 IMAGE:30915322), complete cds. ACCESSION BC074822 VERSION BC074822.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 772) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 772) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 4, 2004 this sequence version replaced BC074822.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Genome Sequence Centre, British Columbia Cancer Center cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRBU Plate: 2 Row: E Column: 11. FEATURES Location/Qualifiers source 1..772 /db_xref="H-InvDB:HIT000265329" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:103930 IMAGE:30915322" /tissue_type="Lung, PCR rescued clones" /clone_lib="NIH_MGC_265" /lab_host="DH10B" /note="Vector: pCR4 Topo TA" gene 1..772 /gene="CLEC4A" /gene_synonym="DCIR" /gene_synonym="DDB27" /gene_synonym="HDCGC13P" /gene_synonym="LLIR" /db_xref="GeneID:50856" /db_xref="HGNC:HGNC:13257" /db_xref="MIM:605306" CDS 23..736 /gene="CLEC4A" /gene_synonym="DCIR" /gene_synonym="DDB27" /gene_synonym="HDCGC13P" /gene_synonym="LLIR" /codon_start=1 /product="C-type lectin domain family 4, member A" /protein_id="AAH74822.1" /db_xref="GeneID:50856" /db_xref="HGNC:HGNC:13257" /db_xref="MIM:605306" /translation="MTSEITYAEVRFKNEFKSSGINTASSAASKERTAPHKSNTGFPK LLCASLLIFFLLLAISFFIAFVIFFQKYSQLLEKKTTKELVHTTLECVKKNMPVEETA WSCCPKNWKSFSSNCYFISTESASWQDSEKDCARMEAHLLVINTQEEQDFIFQNLQEE SAYFVGLSDPEGQRHWQWVDQTPYNESSTFWHPREPSDPNERCVVLNFRKSPKRWGWN DVNCLGPQRSVCEMMKIHL" BASE COUNT 223 a 163 c 168 g 218 t ORIGIN 1 aagcagaagc tctcttccca ttatgacttc ggaaatcact tatgctgaag tgaggttcaa 61 aaatgaattc aagtcctcag gcatcaacac agcctcttct gcagcttcca aggagaggac 121 tgcccctcac aaaagtaata ccggattccc caagctgctt tgtgcctcac tgttgatatt 181 tttcctgcta ttggcaatct cattctttat tgcttttgtc attttctttc aaaaatattc 241 tcagcttctt gaaaaaaaga ctacaaaaga gctggttcat acaacattgg agtgtgtgaa 301 aaaaaatatg cccgtggaag agacagcctg gagctgttgc ccaaagaatt ggaagtcatt 361 tagttccaac tgctacttta tttctactga atcagcatct tggcaagaca gtgagaagga 421 ctgtgctaga atggaggctc acctgctggt gataaacact caagaagagc aggatttcat 481 cttccagaat ctgcaagaag aatctgctta ttttgtgggg ctctcagatc cagaaggtca 541 gcgacattgg caatgggttg atcagacacc atacaatgaa agttccacat tctggcatcc 601 acgtgagccc agtgatccca atgagcgctg cgttgtgcta aattttcgta aatcacccaa 661 aagatggggc tggaatgatg ttaattgtct tggtcctcaa aggtcagttt gtgagatgat 721 gaagatccac ttatgaactg aacattctcc atgaacaggt ggttggattg gt //