LOCUS BC074783 1195 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens wingless-type MMTV integration site family, member 5A,
mRNA (cDNA clone IMAGE:30915338), partial cds.
ACCESSION BC074783
VERSION BC074783.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1195)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1195)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 4, 2004 this sequence version replaced BC074783.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
Center
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBU Plate: 2 Row: G Column: 3.
FEATURES Location/Qualifiers
source 1..1195
/db_xref="H-InvDB:HIT000265290"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30915338"
/tissue_type="Pooled tissue, PCR rescued clones"
/clone_lib="NIH_MGC_245"
/note="Vector: pCR4 Topo TA"
gene <1..1195
/gene="WNT5A"
/gene_synonym="hWNT5A"
/db_xref="GeneID:7474"
/db_xref="HGNC:HGNC:12784"
/db_xref="MIM:164975"
CDS <1..1147
/gene="WNT5A"
/gene_synonym="hWNT5A"
/codon_start=2
/product="WNT5A protein"
/protein_id="AAH74783.2"
/db_xref="GeneID:7474"
/db_xref="HGNC:HGNC:12784"
/db_xref="MIM:164975"
/translation="PLQKSIGILSPGVALGMAGSAMSSKFFLVALAIFFSFAQVVIEA
NSWWSLGMNNPVQMSEVYIIGAQPLCSQLAGLSQGQKKLCHLYQDHMQYIGEGAKTGI
KECQYQFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYAVSAAGVVNAMSRACREGEL
STCGCSRAARPKDLPRDWLWGGCGDNIDYGYRFAKEFVDARERERIHAKGSYESARIL
MNLHNNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSAAA
MRLNSRGKLVQVNSRFNSPTTQDLVYIDPSPDYCVRNESTGSLGTQGRLCNKTSEGMD
GCELMCCGRGYDQFKTVQTERCHCKFHWCCYVKCKKCTEIVDQFVCK"
BASE COUNT 262 a 339 c 365 g 229 t
ORIGIN
1 ccctctccag aagtccattg gaatattaag cccaggagtt gctttgggga tggctggaag
61 tgcaatgtct tccaagttct tcctagtggc tttggccata tttttctcct tcgcccaggt
121 tgtaattgaa gccaattctt ggtggtcgct aggtatgaat aaccctgttc agatgtcaga
181 agtatatatt ataggagcac agcctctctg cagccaactg gcaggacttt ctcaaggaca
241 gaagaaactg tgccacttgt atcaggacca catgcagtac atcggagaag gcgcgaagac
301 aggcatcaaa gaatgccagt atcaattccg acatcgaagg tggaactgca gcactgtgga
361 taacacctct gtttttggca gggtgatgca gataggcagc cgcgagacgg ccttcacata
421 cgcggtgagc gcagcagggg tggtgaacgc catgagccgg gcgtgccgcg agggcgagct
481 gtccacctgc ggctgcagcc gcgccgcgcg ccccaaggac ctgccgcggg actggctctg
541 gggcggctgc ggcgacaaca tcgactatgg ctaccgcttt gccaaggagt tcgtggacgc
601 ccgcgagcgg gagcgcatcc acgccaaggg ctcctacgag agtgctcgca tcctcatgaa
661 cctgcacaac aacgaggccg gccgcaggac ggtgtacaac ctggctgatg tggcctgcaa
721 gtgccatggg gtgtccggct catgtagcct gaagacatgc tggctgcagc tggcagactt
781 ccgcaaggtg ggtgatgccc tgaaggagaa gtacgacagc gcggcggcca tgcggctcaa
841 cagccggggc aagttggtac aggtcaacag ccgcttcaac tcgcccacca cacaagacct
901 ggtctacatc gaccccagcc ctgactactg cgtgcgcaat gagagcaccg gctcgctggg
961 cacgcagggc cgcctgtgca acaagacgtc ggagggcatg gatggctgcg agctcatgtg
1021 ctgcggccgt ggctacgacc agttcaagac cgtgcagacg gagcgctgcc actgcaagtt
1081 ccactggtgc tgctacgtca agtgcaagaa gtgcacggag atcgtggacc agtttgtgtg
1141 caagtagtgg gtgccaccca gcactcagcc ccgctcccag gacccgctta tttat
//