LOCUS BC074781 1246 bp mRNA linear HUM 10-JUN-2008
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 60, mRNA (cDNA
clone IMAGE:30915336), partial cds.
ACCESSION BC074781
VERSION BC074781.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1246)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1246)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 4, 2004 this sequence version replaced BC074781.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
Center
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBU Plate: 2 Row: G Column: 1.
FEATURES Location/Qualifiers
source 1..1246
/db_xref="H-InvDB:HIT000265288"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30915336"
/tissue_type="Pooled tissue, PCR rescued clones"
/clone_lib="NIH_MGC_271"
/note="Vector: pCR4 Topo TA with reversed insert"
gene <1..1246
/gene="DDX60"
/db_xref="GeneID:55601"
/db_xref="HGNC:HGNC:25942"
CDS <1..1210
/gene="DDX60"
/codon_start=2
/product="DDX60 protein"
/protein_id="AAH74781.1"
/db_xref="GeneID:55601"
/db_xref="HGNC:HGNC:25942"
/translation="SVYLDALNYRQMSGRAGRRGQDLMGDVYFFDIPFPKIGKLIKSN
VPELRGHFPLSITLVLRLMLLASKGDDPEDAKAKVLSVLKHSLLSFKQPRVMDMLKLY
FLFSLQFLVKEGYLDQEGNPMGFAGLVSHLHYHEPSNLVFVSFLVNGLFHDLCQPTRK
GSKHFSQDVMEKLVLVLAHLFGRRYFPPKFQDAHFEFYQSKVFLDDLPEDFSDALDEY
NMKIMEDFTTFLRIVSKLADMNQEYQLPLSKIKFTGKECEDSQLVSHLMSCKEGRVAI
SPFVCLSGNFDDDLLRLETPNHVTLGTIGVNRSQAPVLLSQKFDNRGRKMSLNAYALD
FYKHGSLIGLVQDNRMNEGDAYYLLKDFALTIKSISVSLRELCENEDDNVVLAFEQLS
TTFWEKLNKV"
BASE COUNT 372 a 245 c 253 g 376 t
ORIGIN
1 ctcagtctat ctggatgcgt tgaattatag acagatgtct ggccgtgctg gaagaagagg
61 tcaagacctg atgggagatg tatatttctt tgatattcca ttccccaaaa taggaaaact
121 cataaaatcc aatgttcctg agctgagagg acacttccct ctcagcataa ccctggtcct
181 gcgactcatg ctgctggctt ccaagggaga tgacccagag gatgccaagg caaaggtgct
241 atcagtgcta aagcattcat tgctgtcctt caagcaaccc agagtcatgg acatgttaaa
301 actttacttc ctgttttctt tgcagttcct ggtgaaagag ggctatttag atcaagaagg
361 taatcctatg gggtttgctg gacttgtatc acatttgcat tatcatgaac cttctaatct
421 tgtttttgtc agttttcttg taaatggact cttccatgat ctctgtcagc caaccaggaa
481 aggctcaaaa catttttctc aagacgttat ggaaaagcta gtattagtat tggcacatct
541 ctttggaaga agatattttc caccaaagtt ccaagatgca cacttcgagt tttatcaatc
601 aaaggtgttc cttgatgatc tccctgagga ttttagtgat gctttagatg aatataacat
661 gaaaattatg gaggacttta ccactttcct acgaattgtt tccaaactgg ctgatatgaa
721 tcaggaatat caactcccat tgtcaaaaat caaattcaca ggtaaagaat gtgaagactc
781 tcaactcgta tctcatttga tgagctgcaa ggaaggaaga gtagcaattt caccatttgt
841 ttgtctgtct gggaactttg atgatgattt gcttcgacta gaaactccaa accatgttac
901 tctaggcaca atcggtgtca atcgctctca ggctccagtg ctgttgtcac agaaatttga
961 taaccgagga aggaaaatgt cgcttaatgc ctatgcactg gatttctaca aacatggttc
1021 cttgatagga ttagtccagg ataacaggat gaatgaagga gatgcttatt atttgttgaa
1081 ggattttgca ctcaccatta aatctatcag tgtttccttg cgtgagctat gtgaaaatga
1141 agacgacaac gttgtcttag cctttgaaca actgagtaca actttttggg aaaagttaaa
1201 caaagtctaa aaacaaagtc tatgcaaacc actcaaaaat aattcc
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