LOCUS BC074777 947 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sarcoglycan, gamma (35kDa dystrophin-associated
glycoprotein), mRNA (cDNA clone MGC:104103 IMAGE:30915556),
complete cds.
ACCESSION BC074777
VERSION BC074777.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 947)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 947)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 4, 2004 this sequence version replaced BC074777.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
Center
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRBU Plate: 5 Row: A Column: 5.
FEATURES Location/Qualifiers
source 1..947
/db_xref="H-InvDB:HIT000265284"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104103 IMAGE:30915556"
/tissue_type="Pooled tissue, PCR rescued clones"
/clone_lib="NIH_MGC_245"
/note="Vector: pCR4 Topo TA"
gene 1..947
/gene="SGCG"
/gene_synonym="A4"
/gene_synonym="DAGA4"
/gene_synonym="DMDA"
/gene_synonym="SCARMD2"
/gene_synonym="SCG3"
/gene_synonym="TYPE"
/db_xref="GeneID:6445"
/db_xref="HGNC:HGNC:10809"
/db_xref="MIM:608896"
CDS 44..919
/gene="SGCG"
/gene_synonym="A4"
/gene_synonym="DAGA4"
/gene_synonym="DMDA"
/gene_synonym="SCARMD2"
/gene_synonym="SCG3"
/gene_synonym="TYPE"
/codon_start=1
/product="sarcoglycan, gamma (35kDa dystrophin-associated
glycoprotein)"
/protein_id="AAH74777.1"
/db_xref="GeneID:6445"
/db_xref="HGNC:HGNC:10809"
/db_xref="MIM:608896"
/translation="MVREQYTTATEGICIERPENQYVYKIGIYGWRKRCLYLFVLLLL
IILVVNLALTIWILKVMWFSPAGMGHLCVTKDGLRLEGESEFLFPLYAKEIHSRVDSS
LLLQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVV
GTDKLRVTGPEGALFEHSVETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKI
EALSQMDILFHSSDGMLVLDAETVCLPKLVQGTWGPSGSSQSLYEICVCPDGKLYLSV
AGVSTTCQEHSHICL"
BASE COUNT 240 a 210 c 243 g 254 t
ORIGIN
1 cagctgtagt tcattcgcca gtgtgctttt cttaatatct aagatggtgc gtgagcagta
61 cactacagcc acagaaggca tctgcataga gaggccagag aatcagtatg tctacaaaat
121 tggcatttat ggctggagaa agcgctgtct ctacttgttt gttcttcttt tactcatcat
181 cctcgttgtg aatttagctc ttacaatttg gattcttaaa gtgatgtggt tttctccagc
241 aggaatgggc cacttgtgtg taacaaaaga tggactgcgc ttggaagggg aatcagaatt
301 tttattccca ttgtatgcca aagaaataca ctccagagtg gactcatctc tgctgctaca
361 atcaacccag aatgtgactg taaatgcgcg caactcagaa ggggaggtca caggcaggtt
421 aaaagtcggt cccaaaatgg tagaagtcca gaatcaacag tttcagatca actccaacga
481 cggcaagcca ctatttactg tagatgagaa ggaagttgtg gttggtacag ataaacttcg
541 agtaactggg cctgaagggg ctctttttga acattcagtg gagacacccc ttgtcagagc
601 cgacccgttt caagacctta gattagaatc ccccactcgg agtctaagca tggatgcccc
661 aaggggtgtg catattcaag ctcacgctgg gaaaattgag gcgctttctc aaatggatat
721 tctttttcat agtagtgatg gaatgcttgt gcttgatgct gaaactgtgt gcttacccaa
781 gctggtgcag gggacgtggg gtccctctgg cagctcacag agcctctacg aaatctgtgt
841 gtgtccagat gggaagctgt acctgtctgt ggccggtgtg agcaccacgt gccaggagca
901 cagccacatc tgcctctgag ctgcctgcgt cctctcggtg agctgtg
//