LOCUS BC073946 2118 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens transglutaminase 2 (C polypeptide,
protein-glutamine-gamma-glutamyltransferase), mRNA (cDNA clone
IMAGE:5405599), partial cds.
ACCESSION BC073946
VERSION BC073946.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2118)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2118)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2118
/db_xref="H-InvDB:HIT000265169"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5405599"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2118
/gene="TGM2"
/gene_synonym="TG2"
/gene_synonym="TGC"
/db_xref="GeneID:7052"
/db_xref="MIM:190196"
CDS <1..283
/gene="TGM2"
/gene_synonym="TG2"
/gene_synonym="TGC"
/codon_start=2
/product="TGM2 protein"
/protein_id="AAH73946.1"
/db_xref="GeneID:7052"
/db_xref="MIM:190196"
/translation="GEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEI
PDPVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA"
BASE COUNT 534 a 605 c 532 g 447 t
ORIGIN
1 tggggagccc aagcagaaac gcaagctggt ggctgaggtg tccctgcaga acccgctccc
61 tgtggccctg gaaggctgca ccttcactgt ggagggggcc ggcctgactg aggagcagaa
121 gacggtggag atcccagacc ccgtggaggc aggggaggaa gttaaggtga gaatggacct
181 gctgccgctc cacatgggcc tccacaagct ggtggtgaac ttcgagagcg acaagctgaa
241 ggctgtgaag ggcttccgga atgtcatcat tggccccgcc taagggaccc ctgctcccag
301 cctgctgaga gcccccacct tgatcccaat ccttatccca agctagtgag caaaatatgc
361 cccttcttgg gccccagacc ccagggcagg gtgggcagcc tatgggggct ctcggaaatg
421 gaatgtgccc ctggcccatc tcagcctcct gagcctgtgg gtccccactc accccctttg
481 ctgtgaggaa tgctctgtgc cagaaacagt gggagccctg accttggctg actggggctg
541 gggtgagaga ggaaagacct acattccctc tcctgcccag atgccctttg gaaagccatt
601 gaccacccac catattgttt gatctacttc atagctcctt ggagcaggca aaaaagggac
661 agcatgcccc ttggctggat cagggaatcc agctccctag actgcatccc gtacctcttc
721 ccatgactgc acccagctcc aggggccctt gggacagcca gagctgggtg gggacagtga
781 taggcccaag gtcccctcca catcccagca gcccaagctt aatagccctc cccctcaacc
841 tcaccattgt gaagcaccta ctatgtgctg ggtgcctccc acacttgctg gggctcacgg
901 ggcctccaac ccatttaatc accatgggaa actgttgtgg gcgctgcttc caggataagg
961 agactgaggc ttagagagag gaggcagccc cctccacacc agtggcctcg tggttattag
1021 caaggctggg taatgtgaag gcccaagagc agagtctggg cctctgactc tgagtccact
1081 gctccattta taaccccagc ctgacctgag actgtcggag aggctgtctg gggcctttat
1141 caaaaaaaga ctcagccaag acaaggaggt agagagggga ctgggggact gggagtcaga
1201 gccctggctg ggttcaggtc ccacgtctgg ccaggcactg ccttctcctc tctgggcctt
1261 tgtttccttg ttggtcagag gagtgattga accagctcat ctccaaggat cctctccact
1321 ccatgtttgc aatgctttta tatggcccag ccttgtaaat aaccacaagg tccactccct
1381 gctccacgaa gccttaagcc ataggcccag gatatttctg agagtgaaac catgactgtg
1441 accaccttct gtccccagcc ctgtcctggt tccttcctat gcccaggtac cacccttcag
1501 accccagttc taggggagaa gagccctgga cacccctgct ctacccatga gcctgcccgc
1561 tgcaatgcct agacttccca acagccttag ctgccagtgc tggtcactaa ccaacaaggt
1621 tggcacccca gctacccctt ctttgcaggg ctaaggcccc caaacatagc ccctgccccg
1681 gaggaagctt ggggaaccca tgagttgtca gctttgactt tatctcctgc tctttctaca
1741 tgactgggcc tcccttgggc tggaagaatt ggggattctc tattggaggt gagatcacag
1801 cctccagggc cccccaaatc ccagggaagg acttggagag aatcatgctg ttgcatttag
1861 aactttctgc tttgcacagg aaagagtcac acaattaatc aacatgtata ttttctctat
1921 acatagagct ctatttctct acggttttat aaaagccttg ggttccaacc aggcagtaga
1981 tgtgcttctg aaccgcaagg agcaaacact gaaataaaat agtttatttt tcacactcaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaaaaaaaa aaaaaaaa
//