LOCUS BC073914 1065 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens SH3 domain containing ring finger 2, mRNA (cDNA clone
IMAGE:5163966), complete cds.
ACCESSION BC073914
VERSION BC073914.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1065)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1065)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: g Column: 10
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1065
/db_xref="H-InvDB:HIT000265138"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5163966"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1065
/gene="SH3RF2"
/gene_synonym="FLJ23654"
/gene_synonym="RNF158"
/db_xref="GeneID:153769"
CDS 252..914
/gene="SH3RF2"
/gene_synonym="FLJ23654"
/gene_synonym="RNF158"
/codon_start=1
/product="SH3RF2 protein"
/protein_id="AAH73914.1"
/db_xref="GeneID:153769"
/translation="MRKSKWWQRDGSLQRPLQSGIPTLVVGSLRRSPTMVLRPQQFQF
YQPQGIPSSPSAVVVEMGSKPALTGEPALTCISRGSEARIHSAASSLIMEDKEIPIKS
EPLPKPPASAPPSILVKPENSRNGIEKQVKTVRFQNYSPPPTKHYTSHPTSGKPEQPA
TLKASQPEAASLGPEMTVLFAHRSGCHSGQQTDLRRKSALAKATTLVSTASGTQTVFP
SK"
BASE COUNT 324 a 332 c 235 g 174 t
ORIGIN
1 ccacgtccgg aggagggcag caagaatgaa agacctctag ttttccagac tcccggagcc
61 ctggtctcta caccacatgg acgttatcca cctcctctgt gtcctcccaa ggcagcattt
121 cagaaggtga tccacggcaa agccgtccct tcaaatccgt ctttgtgccc actgccatag
181 tcaaccccgt gagaagcaca gccggccctg ggactttagg acaagggtct cttcggaaag
241 ggcggagcag catgagaaag agtaagtggt ggcagagaga tggatccctg cagagacccc
301 tccagtccgg gatccccact ctcgtggtag gctccctcag acgcagcccc accatggtcc
361 ttcggcctca gcagttccaa ttctaccagc cacaggggat cccctcctcc ccctcagccg
421 tggtggtgga gatggggtcc aagcctgccc tcacggggga gcccgccctc acgtgcatca
481 gcaggggcag tgaggcccgg atccactccg cggccagctc cctcattatg gaagacaaag
541 aaatccccat caagagtgag cctctgccaa aaccgcccgc atctgcccca ccatccatcc
601 tggtgaaacc agaaaactca agaaatggca tcgaaaagca agtcaaaacc gtgagatttc
661 agaattacag ccctcctccc accaaacatt acacctccca tcccacctcc ggaaagcctg
721 aacagccagc caccctcaag gcgtcccagc ctgaagcagc gtccttgggc ccagagatga
781 ccgtcctatt tgcccaccga agtggctgcc actccggaca gcagacagac ctccggagaa
841 agtcagctct tgccaaggcc acaaccctgg tgtccactgc ctcaggcacg cagaccgtgt
901 ttcccagcaa atgaacctac gggtggcttt ttcctagacc ccaaagaggt gaattgcatt
961 taaatacagt ctgcctccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//