LOCUS BC073893 2637 bp mRNA linear HUM 03-AUG-2004
DEFINITION Homo sapiens ankyrin repeat and IBR domain containing 1, mRNA (cDNA
clone IMAGE:3921597), partial cds.
ACCESSION BC073893
VERSION BC073893.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2637)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2637)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: b Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2637
/db_xref="H-InvDB:HIT000265117"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3921597"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2637
/gene="ANKIB1"
/gene_synonym="DKFZP434A0225"
/gene_synonym="KIAA1386"
/db_xref="GeneID:54467"
CDS <1..2238
/gene="ANKIB1"
/gene_synonym="DKFZP434A0225"
/gene_synonym="KIAA1386"
/codon_start=1
/product="ANKIB1 protein"
/protein_id="AAH73893.1"
/db_xref="GeneID:54467"
/translation="DPVDMPCGHDFCRGCWESFLNLKIQEGEAHNIFCPAYDCFQLVP
VDIIESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVRLTKQGSNTSGSDTL
SFPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQTWKNWLQKITEMKPEELVGVSEAYE
DAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICLEEWKKHSSSTGGY
YRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMHYYTRFKNHEHSYQLEQRLLK
TAKEKMEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRILKCSYPYGFFLEPKSTKKE
IFELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIKAACLVQQKRQEFLASVARGVAPAD
SPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGDVHSLLSNPPDPDEPS
ESTLDIPEGGSSSRRPGTSVVSSASMSVLHSSSLRDYTPASRSENQDSLQALSSLDED
DPNILLAIQLSLQESGLALDEETRDFLSNEASLGAIGTSLPSRLDSVPRNTDSPRAAL
SSSELLELGDSLMRLGAENDPFSTDTLSSHPLSEARSDFCPSSSDPDSAGQDPNINDN
LLGNIMAWFHDMNPQSIALIPPATTEISADSQLPCIKDGSEGVKDVELVLPEDSMFED
ASVSEGRGTQIEENPLEENILAGEAASQAGDSGNEAANRGDGSDVSSQTPQTSSDWLE
QVHLV"
BASE COUNT 806 a 565 c 598 g 668 t
ORIGIN
1 gaccctgtgg atatgccctg tggacatgac ttttgtagag gatgttggga gtcgtttttg
61 aatctgaaaa ttcaagaagg tgaagctcac aacatttttt gccctgcata tgattgcttc
121 caacttgtac ctgtggatat catagaaagt gtagtttcaa aggagatgga caaacgatac
181 ctacagtttg atattaaggc ctttgttgaa aataatcctg ccattaaatg gtgtcctact
241 ccaggctgtg acagagcagt aagactaacg aaacaagggt caaatacatc tggatctgat
301 acactcagct tcccattgct gagagctcct gctgttgatt gtggaaaagg acacctcttc
361 tgctgggagt gccttggtga agcacatgag ccttgtgact gccaaacatg gaagaattgg
421 ctgcaaaaaa taaccgaaat gaaaccagaa gaacttgtgg gagttagtga agcctacgag
481 gatgccgcca attgtctctg gttattaact aactccaagc cttgtgccaa ctgtaagtct
541 ccaatacaga agaatgaagg ctgcaatcac atgcagtgtg ctaagtgcaa gtatgacttt
601 tgctggattt gccttgaaga gtggaaaaaa catagttcgt ccactggagg ttattacaga
661 tgtactcgct atgaagtcat tcaacacgtg gaggagcaat ccaaggaaat gactgtggag
721 gctgagaaaa aacacaaacg atttcaggaa cttgacagat ttatgcacta ttatacaaga
781 tttaaaaacc atgagcatag ttatcagcta gaacaacgcc ttcttaaaac agccaaagaa
841 aagatggagc aattgagcag agctctcaaa gaaactgaag gaggctgtcc agataccact
901 ttcattgaag atgcagttca tgtgctctta aaaactcggc gcattctcaa gtgttcttat
961 ccatatggat ttttcttgga acctaaaagc acaaagaaag aaatttttga actaatgcaa
1021 acagacctag aaatggtcac tgaagacctt gcccagaaag tcaataggcc ttaccttcgc
1081 acaccccgcc acaagatcat caaagcagca tgccttgtac agcagaagag gcaagaattc
1141 ctggcatctg tggctcgggg agtagctcct gcagactcac cagaagctcc aaggcgcagc
1201 tttgctggtg gaacatggga ttgggaatat ttaggatttg catcaccaga ggaatatgct
1261 gaatttcagt atcggaggag gcacagacaa cgtcgtcgag gagatgttca cagtctactc
1321 agtaatcctc cagaccctga tgagccaagt gaaagcactt tagatattcc agaaggcggc
1381 agcagcagcc gcaggcctgg cacatccgtg gtaagttctg catctatgag tgtgctgcac
1441 agctcttccc tgcgtgacta cacccctgcc agtcgctctg aaaaccagga ctctcttcag
1501 gctctgagtt cgttggatga agacgatccc aatatacttc ttgcaataca gttatcactg
1561 caagagtctg ggctggccct cgatgaagaa actagagact tcctcagtaa tgaagcatcc
1621 ttaggtgcga taggcacttc tttaccttcc aggctggact ctgtccccag aaatacagat
1681 agccctcggg ctgcattgag cagctctgag cttttggaac ttggtgacag cctcatgaga
1741 ctaggagcag agaatgaccc attttcaact gacaccctga gctcacaccc tctcagtgag
1801 gcaagaagtg atttctgtcc ctcatctagt gatcctgact cagctggcca ggaccccaac
1861 atcaatgaca atcttctcgg caacatcatg gcttggtttc atgacatgaa ccctcagagt
1921 attgccctga ttcctccagc aactacagaa atcagtgcag attcccagct cccctgtatc
1981 aaagatgggt cagaaggtgt gaaggatgtg gaactggtgc tgccagaaga ttcaatgttt
2041 gaagatgcca gtgtcagtga aggtagagga acccagatag aagaaaatcc tttggaagaa
2101 aatattctgg cgggggaagc agcatctcaa gctggtgaca gtggtaacga ggcagccaac
2161 agaggagatg gttcagatgt ttcaagtcaa acacctcaaa cctcaagtga ctggcttgaa
2221 caagtacatt tagtgtgaac tgcacacatc tgggctctaa atgaattaca ggtacagatg
2281 gtatgctagg tggagtatgc ttgatagaga ctttgattca cttaattcca actcagtgat
2341 aaaccactga cattagggtt gaatacagag aagttccctt gaatggtagc ttcatttttt
2401 attttaacct tacagggaat ttcctttgta cttaattgaa tagcttttcc cctttttgct
2461 gacaaaaaga agagcaagag aaagagaaac aaaaatgaaa taaataagtt gtattccaca
2521 ctctaagaaa atgcagtcct ctatttagcc taggcttgac aatacttaaa ttgaacattt
2581 aaactaaagg cttactccct aatctttggg tggctttcct ttaaaaaaaa aaaaaaa
//