LOCUS BC073884 1805 bp mRNA linear HUM 06-JUL-2004
DEFINITION Homo sapiens TAF3 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 140kDa, mRNA (cDNA clone IMAGE:4368368),
partial cds.
ACCESSION BC073884
VERSION BC073884.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1805)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1805)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1805
/db_xref="H-InvDB:HIT000265108"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4368368"
/tissue_type="Bone, osteosarcoma"
/clone_lib="NIH_MGC_86"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..>1805
/gene="TAF3"
/gene_synonym="TAF140"
/gene_synonym="TAFII140"
/db_xref="GeneID:83860"
/db_xref="MIM:606576"
CDS <1..>1805
/gene="TAF3"
/gene_synonym="TAF140"
/gene_synonym="TAFII140"
/codon_start=3
/product="TAF3 protein"
/protein_id="AAH73884.1"
/db_xref="GeneID:83860"
/db_xref="MIM:606576"
/translation="GASPKWRLSGWRAPCCWGFEVVAGGPGDPFPAAEALEDESGTLL
RSGGGAGEQWQQGLRWRPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDV
LQRYLQQLGRGCHRYSELYGRTDPILDDVGEAFQLMGVSLHELEDYIHNIEPVTFPHQ
IPSFPVSKNNVLQFPQPGSKDAEERKEYIPDYLPPIVSSQEEEEEEQVPTDGGTSAEA
MQVPLEEDDELEEEEIINDENFLGKRPLDSPEAEELPAMKRPRLLSTKGDTLDVVLLE
AREPLSSINTQKIPPMLSPVHVQDSTDLAPPSPEPPMLAPVAKSQMPTAKPLETKSFT
PKTKTKTSSPGQKTKSPKTAQSPAMVGSPIRSPKTVSKEKKSPGRSKSPKSPKSPKVT
THIPQTPVRPETPNRTPSATLSEKISKETIQVKQIQTPPDAGKLNSENQPKKAVVADK
TIEASIDAVIARACAEREPDPFEFSSGSESEGDIFTSPKRISGPECTTPKASTSANNF
TKSGSTPLPLSGGTSSSDNSWTMDASIDEVVRKAKLGTPSNMPPNFPYISSPSVSPPT
PEPLHKVYEEKTKLPSSVEVKKKLKKELKTKKKKK"
BASE COUNT 522 a 469 c 440 g 374 t
ORIGIN
1 gcggagcgag tccaaaatgg cggctctcag gctggcgcgc tccgtgctgc tggggctttg
61 aggtggtcgc cgggggtccg ggggaccctt tccccgccgc ggaagcccta gaggatgaat
121 cggggaccct gctaaggtct ggcggcgggg ctggagagca gtggcagcaa gggctgcggt
181 ggcgtccacg cagcgggatg tgcgagagtt actccaggtc gttgttgagg gtctcggtgg
241 cgcagatctg ccaggcgctg ggctgggact cggtgcagct cagcgcctgc cacctcctca
301 cggacgtgct gcagcgctat ctgcagcagc tgggccgggg ctgccatcgg tactctgagc
361 tctatggccg aacagaccca attttggatg atgttggtga agctttccag ctgatggggg
421 ttagtctaca tgaactagaa gactatattc acaacattga gcctgtcacc ttcccacacc
481 aaattccgtc atttcctgtt agcaagaaca atgtacttca gtttcctcaa cctggaagta
541 aagatgcaga ggaaagaaaa gaatacattc ctgattacct gccacccatt gtgtcttctc
601 aagaagaaga agaagaagag caggtgccca ctgatggagg cacatcagca gaagccatgc
661 aggttccctt ggaagaagat gatgaattgg aggaggaaga aattattaat gatgagaatt
721 tcctgggcaa gagaccactg gatagtcctg aagctgaaga actgccagcc atgaagcggc
781 ctcggctatt aagcactaaa ggggacacgc tagatgttgt gttattggaa gctcgagagc
841 cactcagctc aataaatact caaaagatcc caccaatgct ttctccagtc catgtacagg
901 acagtacaga cttggcacct ccctcacccg agccgccaat gttggctcca gttgcaaaat
961 cacaaatgcc aactgcaaaa ccattagaaa caaagtcatt tacacctaaa acaaagacta
1021 aaactagctc tccaggacag aagactaaat cacctaaaac cgcccagtca ccagcaatgg
1081 tcggaagtcc tattcgatca ccaaaaactg tatccaaaga aaagaaatca cctggacgtt
1141 ccaagagccc caagagtccc aagagcccca aggtcacgac tcacattccc caaacacctg
1201 tgagacctga aacgcccaac aggactcctt cagctacact cagtgaaaaa atcagtaaag
1261 agactatcca ggtaaaacaa atacagacac cccctgatgc tgggaaactg aacagtgaga
1321 atcagccgaa aaaggctgtg gtagcagata aaacgattga ggcctctatc gatgctgtga
1381 ttgcacgagc ctgtgctgag cgagagccag atcctttcga attttcttct ggatcggaat
1441 ctgaaggaga catttttact agccctaaga gaatttcagg cccggagtgt actactccca
1501 aagcttccac ttccgcgaac aatttcacaa agtcaggatc cactcctctg cctctttccg
1561 gtggaacctc aagttccgat aactcatgga caatggatgc ctccattgat gaggttgtac
1621 gtaaagcaaa actgggaaca ccttcaaata tgccccccaa ctttccttat atctcttctc
1681 cgtcagtgtc tcctcccact cccgaacctc tccacaaggt gtatgaggag aaaaccaagc
1741 tgccttcctc cgtggaggta aagaagaagt tgaaaaagga actaaagact aaaaaaaaaa
1801 aaaaa
//