LOCUS BC073768 794 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heat shock 27kDa protein 1, mRNA (cDNA clone MGC:88776
IMAGE:5444848), complete cds.
ACCESSION BC073768
VERSION BC073768.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 794)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 794)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: g Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..794
/db_xref="H-InvDB:HIT000264996"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88776 IMAGE:5444848"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..794
/gene="HSPB1"
/gene_synonym="CMT2F"
/gene_synonym="HS.76067"
/gene_synonym="Hsp25"
/gene_synonym="HSP27"
/gene_synonym="HSP28"
/db_xref="GeneID:3315"
/db_xref="HGNC:HGNC:5246"
/db_xref="MIM:602195"
CDS 21..638
/gene="HSPB1"
/gene_synonym="CMT2F"
/gene_synonym="HS.76067"
/gene_synonym="Hsp25"
/gene_synonym="HSP27"
/gene_synonym="HSP28"
/codon_start=1
/product="heat shock 27kDa protein 1"
/protein_id="AAH73768.1"
/db_xref="GeneID:3315"
/db_xref="HGNC:HGNC:5246"
/db_xref="MIM:602195"
/translation="MTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQ
WLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVN
HFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPE
GTLTVEAPMPKLATQSNEITIPVTFESRAQLGGPEAAKSDETAAK"
BASE COUNT 175 a 280 c 214 g 125 t
ORIGIN
1 ccagagcaga gtcagccagc atgaccgagc gccgcgtccc cttctcgctc ctgcggggcc
61 ccagctggga ccccttccgc gactggtacc cgcatagccg cctcttcgac caggccttcg
121 ggctgccccg gctgccggag gagtggtcgc agtggttagg cggcagcagc tggccaggct
181 acgtgcgccc cctgcccccc gccgccatcg agagccccgc agtggccgcg cccgcctaca
241 gccgcgcgct cagccggcaa ctcagcagcg gggtctcgga gatccggcac actgcggacc
301 gctggcgcgt gtccctggat gtcaaccact tcgccccgga cgagctgacg gtcaagacca
361 aggatggcgt ggtggagatc accggcaagc acgaggagcg gcaggacgag catggctaca
421 tctcccggtg cttcacgcgg aaatacacgc tgccccccgg tgtggacccc acccaagttt
481 cctcctccct gtcccctgag ggcacactga ccgtggaggc ccccatgccc aagctagcca
541 cgcagtccaa cgagatcacc atcccagtca ccttcgagtc gcgggcccag cttgggggcc
601 cagaagctgc aaaatccgat gagactgccg ccaagtaaag ccttagcccg gatgcccacc
661 cctgctgccg ccactggctg tgcctccccc gccacctgtg tgttcttttg atacatttat
721 cttctgtttt tctcaaataa agttcaaagc aacaaaaaaa aaaaaaaaaa aaaaaaaaaa
781 aaaaaaaaaa aaaa
//