LOCUS BC073156 1601 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens XIAP associated factor 1, mRNA (cDNA clone MGC:87949
IMAGE:6068243), complete cds.
ACCESSION BC073156
VERSION BC073156.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1601)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1601)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: h Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40288190.
FEATURES Location/Qualifiers
source 1..1601
/db_xref="H-InvDB:HIT000264951"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87949 IMAGE:6068243"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1601
/gene="XAF1"
/gene_synonym="BIRC4BP"
/gene_synonym="HSXIAPAF1"
/gene_synonym="XIAPAF1"
/db_xref="GeneID:54739"
/db_xref="HGNC:HGNC:30932"
/db_xref="MIM:606717"
CDS 42..947
/gene="XAF1"
/gene_synonym="BIRC4BP"
/gene_synonym="HSXIAPAF1"
/gene_synonym="XIAPAF1"
/codon_start=1
/product="XIAP associated factor 1"
/protein_id="AAH73156.1"
/db_xref="GeneID:54739"
/db_xref="HGNC:HGNC:30932"
/db_xref="MIM:606717"
/translation="MEGDFSVCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKE
TMEEHCKLEHQQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHE
SYCGSRTELCQGCGQFIMHRMLAQHRDVCRSEQAQLGKGERISAPEREIYCHYCNQMI
PENKYFHHMGKCCPDSEFKKHFPVGNPEILPSSLPSQAAENQTSTMEKDVRPKTRSIN
RFPLHSESSSKKAPRSKNKTLDPLLMSEPKPRTSSPRGDKAAYDILRRCSQCGILLPL
PILNQHQEKCRWLASSKGKQVRNFS"
BASE COUNT 541 a 361 c 341 g 358 t
ORIGIN
1 caagaaacga aactcaaccg aaagcctgca gagagcagaa catggaagga gacttctcgg
61 tgtgcaggaa ctgtaaaaga catgtagtct ctgccaactt caccctccat gaggcttact
121 gcctgcggtt cctggtcctg tgtccggagt gtgaggagcc tgtccccaag gaaaccatgg
181 aggagcactg caagcttgag caccagcagg ttgggtgtac gatgtgtcag cagagcatgc
241 agaagtcctc gctggagttt cataaggcca atgagtgcca ggagcgccct gttgagtgta
301 agttctgcaa actggacatg cagctcagca agctggagct ccacgagtcc tactgtggca
361 gccggacaga gctctgccaa ggctgtggcc agttcatcat gcaccgcatg ctcgcccagc
421 acagagatgt ctgtcgcagt gaacaggccc agctcgggaa aggggaaaga atttcagctc
481 ctgaaaggga aatctactgt cattattgca accaaatgat tccagaaaat aagtatttcc
541 accatatggg taaatgttgt ccagactcag agtttaagaa acactttcct gttggaaatc
601 cagaaattct tccttcatct cttccaagtc aagctgctga aaatcaaact tccacgatgg
661 agaaagatgt tcgtccaaag acaagaagta taaacagatt tcctcttcat tctgaaagtt
721 catcaaagaa agcaccaaga agcaaaaaca aaaccttgga tccacttttg atgtcagagc
781 ccaagcccag gaccagctcc cctagaggag ataaagcagc ctatgacatt ctgaggagat
841 gttctcagtg tggcatcctg cttcccctgc cgatcctaaa tcaacatcag gagaaatgcc
901 ggtggttagc ttcatcaaaa ggaaaacaag tgagaaattt cagctagatt tggaaaagga
961 aaggtactac aaattcaaaa gatttcactt ttaacactgg cattcctgcc tacttgctgt
1021 ggtggtcttg tgaaaggtga tgggttttat tcgttgggct ttaaaagaaa aggtttggca
1081 gaactaaaaa caaaactcac gtatcatctc aatagataca gaaaaggctt ttgataaaat
1141 tcaacttgac ttcatgttaa aaaccctcaa caaaccaggc gtcgaaggaa catacctcaa
1201 aataataaga gccatctatg acaaaaccac agccaacatc atactgaatg agcaaaagct
1261 ggagcattac tcttgagaag tagaacaagg cacttcagtc ctattcaaca tagtactgga
1321 agtcctcgcc acagcaatca ggcaagagaa agaaataaaa ggcaaccaaa aagaaaggaa
1381 gtcgaagtat ctctgtttgc agacgatatg attctatatc tagaaaaccc catgatcttg
1441 gcccaaaagc tcctagatct gataaacaac ttcagctaac tttcaggaga caaaatcaat
1501 atacaaaata tggtagcatt tttatacacc aacgacatcc aagctgagag ccaaatcaag
1561 aatgcaatcc tattcacaat tgccacaaaa aaaaaaaaaa a
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