LOCUS BC072450 3296 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10), mRNA (cDNA clone IMAGE:6169361), partial cds. ACCESSION BC072450 VERSION BC072450.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3296) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3296) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 174 Row: k Column: 20. FEATURES Location/Qualifiers source 1..3296 /db_xref="H-InvDB:HIT000264894" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6169361" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..3296 /gene="GALNT10" /gene_synonym="DKFZp586H0623" /gene_synonym="FLJ00205" /gene_synonym="FLJ11715" /gene_synonym="GalNAcT10" /gene_synonym="pp-GalNAc-T10" /db_xref="GeneID:55568" /db_xref="MIM:608043" CDS <1..1244 /gene="GALNT10" /gene_synonym="DKFZp586H0623" /gene_synonym="FLJ00205" /gene_synonym="FLJ11715" /gene_synonym="GalNAcT10" /gene_synonym="pp-GalNAc-T10" /codon_start=3 /product="GALNT10 protein" /protein_id="AAH72450.1" /db_xref="GeneID:55568" /db_xref="MIM:608043" /translation="HLKKPLEDYMALFPSVRILRTKKREGLIRTRMLGASVATGDVIT FLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEM YYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEIS FKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR RPEYRHLSAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNV GTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCF DAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSS LTQQWLFEHTNSTVLEKFNRN" BASE COUNT 845 a 853 c 855 g 743 t ORIGIN 1 agcacctgaa gaagcctctt gaagactaca tggccctttt ccccagtgtg aggattcttc 61 gaaccaagaa acgggaaggg ctgataagga cccgaatgct gggggcctca gtggcaactg 121 gggatgtcat cacattcttg gattcacact gtgaagccaa tgtcaactgg cttcccccct 181 tgcttgaccg cattgctcgg aaccgcaaga ccattgtgtg cccgatgatt gatgtaattg 241 accatgacga ctttcggtac gagacacagg caggggatgc catgcgggga gcctttgact 301 gggagatgta ctacaagcgg atcccgatcc ctccagaact gcagaaagct gaccccagcg 361 acccatttga gtctcccgtg atggccggtg gactgttcgc cgtggatcgg aagtggttct 421 gggaactcgg cgggtatgac ccaggcttgg agatctgggg aggggagcag tatgaaatct 481 ccttcaaggt gtggatgtgt gggggccgca tggaggacat cccctgctcc agggtgggcc 541 atatctacag gaagtatgtg ccctacaagg tcccggccgg agtcagcctg gcccggaacc 601 ttaagcgggt ggccgaagtg tggatggatg agtacgcaga gtacatttac cagcgccggc 661 ctgaataccg ccacctctcc gctggggatg tcgcagtcca gaaaaagctc cgcagctccc 721 ttaactgcaa gagtttcaag tggtttatga cgaagatagc ctgggacctg cccaaattct 781 acccacccgt ggagcccccg gctgcagctt ggggggagat ccgaaatgtg ggcacagggc 841 tgtgtgcaga cacaaagcac ggggccttgg gctccccact aaggctagag ggctgcgtcc 901 gaggccgtgg ggaggctgcc tggaacaaca tgcaggtatt caccttcacc tggagagagg 961 acatccggcc tggagacccc cagcacacca agaagttctg ctttgatgcc atttcccaca 1021 ccagccctgt cacgctgtac gactgccaca gcatgaaggg caaccagctg tggaaatacc 1081 gcaaagacaa gaccctgtac caccctgtca gtggcagctg catggactgc agtgaaagtg 1141 accataggat cttcatgaac acctgcaacc catcctctct cacccagcag tggctgtttg 1201 aacacaccaa ctcaacagtc ttggaaaaat tcaataggaa ctgagccctc atgtcccctt 1261 ggcaggcccc ccagggtctg gcactcactg cagacttcct ctttcaaggg aggcagggcc 1321 cctgtgggca ctaggtgtaa aaggtgctgg ccaaatggtt cagggtgaag agggctcttg 1381 attcaggggc tggggtctgc ctggtccttg agcccctgag ttgtgggggt agggtgaaga 1441 gcatatccca caagaggccc cacagggagc agagactgct ttaatccctg ctgacatcac 1501 ggaaaagcaa cagagccttt tcaactttgt cactatgtcc ccttgaacat tatgtgggag 1561 aacaccaagg tagcctaggc cacccaaaag tgagtcctgc gaggttgccc agccctcaga 1621 tggctctcct acatgatggt gctttagaaa caaaggtaaa atttgcctgt ttggggcagc 1681 ttttagtatc gatgccactc atctgcagca gaagagaaag aagtcctctt ggggcttttt 1741 agtttctgcc gtcctggggg gaacattgca gttactgcac agcttctgtt ctctgtcaca 1801 accccaggtg atttggtccg gtcaaaggcc atacttgggg ccctaagagt gttcagtatt 1861 gaatgctgat cagctgccag gtgaggagtc agaagaggga gcccccctag acatttcttt 1921 gcagctatgg acatgcggga tatctccccc tgctctctgg gtatttgaaa tgtcaatttt 1981 agcactctcc aggcacaagg acagcccagc accagcttta cagggcagtg tttcagatgg 2041 ccctgagccc acggaaaagg ccaggtagac ctccaaacta gaaatgctgg ctgatttgcc 2101 ctgatccatg cttccatttc cctgtctctc ttccccaggc aattactggc ctcaaaagag 2161 gaacagaggt gctgcgaggt gctcacctca cagagtctgg aggcctccag gatcaactgt 2221 gggcaaagtg cctgcctctg acctcatcat ggttctagtt ctcatacaga actccagaat 2281 ttttaaagaa ctctataatt ggattgcaaa ctaggatgct acataggatt ctggtattcc 2341 acatccaata tggatttcta gaatgctgtg attaaaggag ccagccaggt gtaatacagt 2401 caaggcagcc cccagcctag agacaatctg tgaaatccaa agttggtggt gttgggaaag 2461 cagggggaca tgtgtccctc agctcagcag aggctgtggt acaacatggt ccttggtgaa 2521 gacctgcacc cctggaacct cccaccatca tcacaactgt agtctcattt gcagtggaga 2581 aaagaacccg acgtcccaca gccagatata cacccagctc catgccagcc cttcatgttt 2641 accttttgct ttgttaatta catgtcagat tcctagaggg cctccagact aataggaagc 2701 atttctgtaa ccaacctgcc acccactgat tcagaaatgg aaatcacatt ccacaatcta 2761 tggcttccac cagctagccc aggaaatact tgaaatcagc attccaatta gtgttgagtc 2821 tcttgattgt gtcatttacc aattaaataa ctgagaccta agtctgggaa cagagccacg 2881 aatctgcctt tgagatgctg gcagatctca aggccatcaa ttattggggg agggagggac 2941 aaacactccc aatcatccac cagtcagact gaatgtgtag ctggcgagga attacttcca 3001 cttctggccc agcacaagcc ctgctttggc cacctgtctg caagagaggc ggcccctgtg 3061 cttgcaacgc ttacgtgttg atcccagtgt ccttttccaa atgagtgctg tagctttaga 3121 agtggccctc tatagaaaga agtcaaaaga tgaggcccct tctagaatct aggataacaa 3181 gagtgttgac agtttgagga gtcgaattga gattcatcat caaagagcaa tgcagcgtcg 3241 ttaaaataaa aactgtgcct tttaaaaaga aaaaaaaaaa aaaaaaaaaa aaaaaa //