LOCUS BC072446 1959 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TSC22 domain family, member 3, mRNA (cDNA clone
MGC:90321 IMAGE:6165765), complete cds.
ACCESSION BC072446
VERSION BC072446.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1959)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1959)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: k Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62865622.
FEATURES Location/Qualifiers
source 1..1959
/db_xref="H-InvDB:HIT000264890"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90321 IMAGE:6165765"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1959
/gene="TSC22D3"
/gene_synonym="DIP"
/gene_synonym="GILZ"
/gene_synonym="hDIP"
/gene_synonym="TSC-22R"
/db_xref="GeneID:1831"
/db_xref="HGNC:HGNC:3051"
/db_xref="MIM:300506"
CDS 245..649
/gene="TSC22D3"
/gene_synonym="DIP"
/gene_synonym="GILZ"
/gene_synonym="hDIP"
/gene_synonym="TSC-22R"
/codon_start=1
/product="TSC22 domain family, member 3"
/protein_id="AAH72446.1"
/db_xref="GeneID:1831"
/db_xref="HGNC:HGNC:3051"
/db_xref="MIM:300506"
/translation="MNTEMYQTPMEVAVYQLHNFSISFFSSLLGGDVVSVKLDNSASG
ASVVAIDNKIEQAMDLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLAS
PEQLEKFQSCLSPEEPAPESPQVPEAPGGSAV"
BASE COUNT 462 a 482 c 513 g 502 t
ORIGIN
1 ggttggactg gcggccgtgg agtttgtgac atacgaggtg acacccctcg agtcacttcc
61 cttcaactcc agctggagcg cctgcttggc tttgggttcg ttctgcagcc ttcgccccgc
121 tcctagcctc agggccggac tccagcgcag agcccagccc agcgcagcct gccagcagcc
181 acccagccgc ccagccgccc agccccgcac gaaacccggc cagagcttcc tagcagcccg
241 agccatgaac accgaaatgt atcagacccc catggaggtg gcggtctacc agctgcacaa
301 tttctccatc tccttcttct cttctctgct tggaggggat gtggtttccg ttaagctgga
361 caacagtgcc tccggagcca gcgtggtggc catagacaac aagatcgaac aggccatgga
421 tctggtgaag aatcatctga tgtatgctgt gagagaggag gtggagatcc tgaaggagca
481 gatccgagag ctggtggaga agaactccca gctagagcgt gagaacaccc tgttgaagac
541 cctggcaagc ccagagcagc tggagaagtt ccagtcctgt ctgagccctg aagagccagc
601 tcccgaatcc ccacaagtgc ccgaggcccc tggtggttct gcggtgtaag tggctctgtc
661 ctcagggtgg gcagagccac taaacttgtt ttacctagtt ctttccagtt tgtttttggc
721 tccccaagca tcatctcacg aggagaactt tacacctagc acagctggtg ccaagagatg
781 tcctaaggac atggccacct gggtccactc cagcgacaga cccctgacaa gagcaggtct
841 ctggaggctg agttgcatgg ggcctagtaa caccaagcca gtgagcctct aatgctactg
901 cgccctgggg gctcccaggg cctgggcaac ttagctgcaa ctggcaaagg agaagggtag
961 tttgaggtgt gacaccagtt tgctccagaa agtttaaggg gtctgtttct catctccatg
1021 gacatcttca acagcttcac ctgacaacga ctgttcctat gaagaagcca cttgtgtttt
1081 aagcagaggc aacctctctc ttctcctctg tttcgtgaag gcaggggaca cagatgggag
1141 agattgagcc aagtcagcct tctgttggtt aatatggtat aatgcatggc tttgtgcaca
1201 gcccagtgtg ggattacagc tttgggatga ccgcttacaa agttctgttt ggttagtatt
1261 ggcatagttt ttctatatag ccataaatgc gtatatatac ccatagggct agatctgtat
1321 cttagtgtag cgatgtatac atatacacat ccacctacat gttgaagggc ctaaccagcc
1381 ttgggagtat tgactggtcc cttacctctt atggctaagt ctttgactgt gttcatttac
1441 caagttgacc cagtttgtct tttaggttaa gtaagactcg agagtaaagg caaggagggg
1501 ggccagcctc tgaatgcggc cacggatgcc ttgctgctgc aaccctttcc ccagctgtcc
1561 actgaaacgt gaagtcctgt tttgaatgcc aaacccacca ttcactggtg ctgactacat
1621 agaatggggt tgagagaaga tcagtttggg cttcacagtg tcatttgaaa acgttttttg
1681 ttttgttttg taattattgt ggaaaacttt caagtgaaca gaaggatggt gtcctactgt
1741 ggatgaggga tgaacaaggg gatggctttg atccaatgga gcctgggagg tgtgcccaga
1801 aagcttgtct gtagcgggtt ttgtgagagt gaacactttc cactttttga caccttatcc
1861 tgatgtatgg ttccaggatt tggattttga ttttccaaat gtagcttgaa atttcaataa
1921 actttgctct gtttttctaa aaataaaaaa aaaaaaaaa
//