LOCUS BC072440 3025 bp mRNA linear HUM 18-AUG-2006 DEFINITION Homo sapiens SET domain containing 2, mRNA (cDNA clone IMAGE:6045080), partial cds. ACCESSION BC072440 VERSION BC072440.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3025) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3025) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 174 Row: g Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 30410776. FEATURES Location/Qualifiers source 1..3025 /db_xref="H-InvDB:HIT000264884" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6045080" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>3025 /gene="SETD2" /gene_synonym="FLJ22472" /gene_synonym="FLJ23184" /gene_synonym="HIF-1" /gene_synonym="HSPC069" /gene_synonym="HYPB" /gene_synonym="KIAA1732" /db_xref="GeneID:29072" /db_xref="HGNC:HGNC:18420" CDS 351..>3025 /gene="SETD2" /gene_synonym="FLJ22472" /gene_synonym="FLJ23184" /gene_synonym="HIF-1" /gene_synonym="HSPC069" /gene_synonym="HYPB" /gene_synonym="KIAA1732" /codon_start=1 /product="SETD2 protein" /protein_id="AAH72440.1" /db_xref="GeneID:29072" /db_xref="HGNC:HGNC:18420" /translation="MERRGKYSSKLERESKRTSENEAIKRCCSPPNELGFRRGSSYSK HDSSASRYKSTLSKPIPKSDKFKNSFCCTELNEEIKQSHSFSLQTPCSKGSELRMINK NPEREKAGSPAPSNRLNDSPTLKKLDELPIFKSEFITHDSHDSIKELDSLSKVKNDQL RSFCPIELNINGSPGAESDLATFCTSKTDAVLMTSDDSVTGSELSPLVKACMLSSNGF QNISRCKEKDLDDTCMLHKKSESPFRETEPLVSPHQDKLMSMPVMTVDYSKTVVKEPV DTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSVMKISSNSFMNVHLESKPVICD SRNLTDHSKFACEEYKQSIGSTSSASVNHFDDLYQPIGSSGIASSLQSLPPGIKVDSL TLLKCGENTSPVLDAVLKSKKSSEFLKHAGKETIVEVGSDLPDSGKGFASRENRRNNG LSGKCLQEAQEEGNSILPERRGRPEISLDERGEGGHVHTSDDSEVVFSSCDLNLTMED SDGVTYALKCDSSGHAPEIVSTVHEDYSGSSESSNDESDSEDTDSDDSSIPRNRLQSV VVVPKNSTLPMEETSPCSSRSSQSYRHYSDHWEDERLESRRHLYEEKFESIASKACPQ TDKFFLHKGTEKNPEISFTQSSRKQIDNRLPELSHPQSDGVDSTSHTDVKSDPLGHPN SEETVKAKIPSRQQEELPIYSSDFEDVPNKSWQQTTFQNRPDSRLGKTELSFSSSCEI PHVDGLHSSEELRNLGWDFSQEKPSTTYQQPDSSYGACGGHKYQQNAEQYGGTRDYWQ GNGYWDPRSGRPPGTGVVYDRTQGQVPDSLTDDREEEENWDQQDGSHFSDQSDKFLLS LQKDKGSVQAPEISSNSIKDTLAVNEKKDFSKKKK" BASE COUNT 1013 a 550 c 638 g 824 t ORIGIN 1 ctcggtatgt atcttcccga tgtagatcag aaagagagcg acggcggagc agatctcact 61 ctaggtctga gagaggctct agaactaatt tatcctattc caggtcagaa cgatctcatt 121 attatgactc tgatcgtcgc taccatagga gctcccctta tcgagagagg acgcgctatt 181 ctcggccata cacagataac agagcacgag agagttctga ctcagaagaa tagtataaga 241 agacatactc aaggcgtacc tcatctcatt cctcttctta cagagaccta aggacatcat 301 cctattctaa atctgatcgg gactgtaaaa ctgagacctc ttacttagag atggaaagaa 361 gaggcaagta ttcttcaaaa ctagaaagag aatctaaaag gacttcagaa aatgaagcaa 421 ttaaaagatg ttgttctccc cctaatgaac tgggattccg acgagggtca tcatattcta 481 agcatgacag tagtgcttcc cgttataaat ctaccctttc aaaacctata cccaagtctg 541 ataaatttaa aaattctttc tgttgtacag aattaaatga agaaatcaaa cagtctcatt 601 cttttagttt acagacacct tgttcaaaag gtagtgaatt aagaatgatt aataaaaatc 661 ctgaaagaga aaaggctggg tctccagctc catcaaatcg attaaatgat tcacctactt 721 taaaaaagct agatgaattg cctattttta agtccgaatt tataacacat gatagccatg 781 atagtattaa ggaattagac tctttatcta aagtgaagaa tgatcaatta agaagttttt 841 gtcccataga attaaatata aatggatctc ctggggcaga atctgatttg gcaacatttt 901 gcacttctaa aactgatgct gttttaatga cttctgatga tagtgtgact ggatcggaat 961 tatccccttt ggtcaaagca tgcatgcttt catcaaatgg atttcagaat attagtaggt 1021 gcaaagaaaa agacttggat gatacctgca tgctgcataa gaagtcagaa agcccattta 1081 gagaaacaga acctctggtg tcaccacacc aagataaact catgtctatg ccagttatga 1141 ctgtggatta ttccaaaaca gtagttaaag aaccagttga tacgagggtt tcttgctgca 1201 aaaccaaaga ttcagacata tactgtactt tgaacgatag caacccttct ttgtgtaact 1261 ctgaagctga aaatattgag ccttcagtta tgaagatttc ttcaaatagc tttatgaatg 1321 tgcatttgga atcaaaacca gttatatgtg atagtagaaa tttgacagat cactcaaaat 1381 ttgcatgtga agaatataag cagagcatcg gtagcactag ttcagcttct gttaatcatt 1441 ttgatgattt atatcaacct attgggagtt caggtattgc ttcatctctt cagagtcttc 1501 caccaggaat aaaggtggac agtctaactc tcttgaaatg cggagagaac acatctccag 1561 ttctggatgc agtgctaaag agtaaaaaaa gttcagagtt tttaaagcat gcagggaaag 1621 aaacaatagt agaagtaggt agtgaccttc ctgattcagg aaagggattt gcttccaggg 1681 agaacaggcg taataatggg ttatctggga aatgtttgca agaggctcaa gaagaaggga 1741 attccatatt gcctgaaaga agaggaagac cagaaatctc tttagatgaa agaggagaag 1801 gaggacatgt gcatacttct gatgactcag aagttgtatt ttcttcttgt gatttgaatt 1861 taaccatgga agacagtgat ggtgtaactt atgcattaaa gtgtgacagt agtggtcatg 1921 ccccagaaat tgtgtctaca gttcatgaag attattctgg ctcttctgaa agttcaaatg 1981 atgaaagtga ttcagaagat acagattcgg atgatagcag tattccaaga aaccgtctcc 2041 agtctgttgt ggttgtgcca aagaattcta ctttgcccat ggaagaaaca agtccttgtt 2101 cttctcggag cagtcaaagt tatagacact attctgacca ttgggaagat gagagattgg 2161 agtcaaggag acatttgtat gaggaaaaat ttgaaagtat agcaagtaaa gcctgtcctc 2221 aaactgataa gtttttcctt cataaaggaa cagagaagaa tccggaaatt tcttttacac 2281 agtccagtag aaaacaaata gataaccgcc tgcctgaact ttctcatcct cagagtgatg 2341 gggttgatag tacaagtcat acagatgtga aatctgaccc tctgggtcac ccaaattcag 2401 aggaaaccgt gaaagccaaa ataccttcta ggcagcaaga agagctgcca atttattctt 2461 ctgattttga agatgtccca aataagtctt ggcaacagac cactttccaa aacaggccag 2521 atagtagact gggaaaaaca gaattgagtt tttcttcctc ttgtgagata ccacatgtgg 2581 atggcttgca ctcatcagaa gagctcagaa acttaggttg ggacttctct caagaaaagc 2641 cttctaccac gtatcagcaa cctgacagta gctatggagc ttgtggtgga cacaagtatc 2701 agcaaaatgc agaacagtat ggtgggacac gtgattactg gcaaggcaat ggttactggg 2761 atccaagatc aggtagacct cctggaactg gggttgtgta tgatcgaact caaggacaag 2821 taccagattc cctaacagat gatcgtgaag aagaggagaa ttgggatcaa caggatggat 2881 cccatttttc agaccagtcc gataaatttc ttctatccct tcagaaagac aaggggtcag 2941 tgcaagcacc tgaaataagc agcaattcca ttaaggacac tttagctgtg aatgaaaaga 3001 aagatttttc aaaaaaaaaa aaaaa //