LOCUS BC072435 1890 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CDK5 regulatory subunit associated protein 3, mRNA
(cDNA clone MGC:87717 IMAGE:5751801), complete cds.
ACCESSION BC072435
VERSION BC072435.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1890)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: c Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28872791.
FEATURES Location/Qualifiers
source 1..1890
/db_xref="H-InvDB:HIT000264880"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87717 IMAGE:5751801"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1890
/gene="CDK5RAP3"
/gene_synonym="C53"
/gene_synonym="HSF-27"
/gene_synonym="IC53"
/gene_synonym="MST016"
/gene_synonym="OK/SW-cl.114"
/db_xref="GeneID:80279"
/db_xref="HGNC:HGNC:18673"
/db_xref="MIM:608202"
CDS 18..1538
/gene="CDK5RAP3"
/gene_synonym="C53"
/gene_synonym="HSF-27"
/gene_synonym="IC53"
/gene_synonym="MST016"
/gene_synonym="OK/SW-cl.114"
/codon_start=1
/product="CDK5 regulatory subunit associated protein 3"
/protein_id="AAH72435.1"
/db_xref="GeneID:80279"
/db_xref="HGNC:HGNC:18673"
/db_xref="MIM:608202"
/translation="MEDHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAA
IQDMPESEEIAQLLSGSYIHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEIIA
LYEKDNTYLVELSSLLVRNVNYEIPSLKKQIAKCQQLQQEYSRKEEECQAGAAEMREQ
FYHSCKQYGITGENVRGELLALVKDLPSQLAEIGAAAQQSLGEAIDVYQASVGFVCES
PTEQVLPMLRFVQKRGNSTVYEWRTGTEPSVVERPHLEELPEQVAEDAIDWGDFGVEA
VSEGTDSGISAEAAGIDWGIFPESDSKDPGGDGIDWGDDAVALQITVLEAGTQAPEGV
ARGPDALTLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVSQFQLAPAILQG
QTKEKMVTMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALK
KELMVQKQQEALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMGTSL"
BASE COUNT 526 a 434 c 558 g 372 t
ORIGIN
1 gcggaagtgg aggaaagatg gaggaccatc agcacgtgcc catcgacatc cagaccagca
61 agctgctcga ttggctggtg gacagaaggc actgcagcct gaaatggcag agtctggtgc
121 tgacgatccg cgagaagatc aatgctgcca tccaggacat gccagagagc gaagagatcg
181 cccagctgct gtctgggtcc tacattcact actttcactg cctaagaatc ctggaccttc
241 tcaaaggcac agaggcctcc acgaagaata tttttggccg atactcttca cagcggatga
301 aggattggca ggagattata gctctgtatg agaaggacaa cacctactta gtggaactct
361 ctagcctcct ggttcggaat gtcaactatg agatcccctc actgaagaag cagattgcca
421 agtgccagca gctgcagcaa gaatacagcc gcaaggagga ggagtgccag gcaggggctg
481 ccgagatgcg ggagcagttc taccactcct gcaagcagta tggcatcacg ggcgaaaatg
541 tccgaggaga actgctggcc ctggtgaagg acctgccgag tcagctggct gagattgggg
601 cagcggctca gcagtccctg ggggaagcca ttgacgtgta ccaggcgtct gtggggtttg
661 tgtgtgagag ccccacagag caggtgttgc caatgctgcg gttcgtgcag aagcggggaa
721 actcaacggt gtacgagtgg aggacaggga cagagccctc tgtggtggaa cgaccccacc
781 tcgaggagct tcctgagcag gtggcagaag atgcgattga ctggggcgac tttggggtag
841 aggcagtgtc tgaggggact gactctggca tctctgccga ggctgctgga atcgactggg
901 gcatcttccc ggaatcagat tcaaaggatc ctggaggtga tgggatagac tggggagacg
961 atgctgttgc tttgcagatc acagtgctgg aagcaggaac ccaggctcca gaaggtgttg
1021 ccaggggccc agatgccctg acactgcttg aatacactga gacccggaat cagttccttg
1081 atgagctcat ggagcttgag atcttcttag cccagagagc agtggagttg agtgaggagg
1141 cagatgtcct gtctgtgagc cagttccagc tggctccagc catcctgcag ggccagacca
1201 aagagaagat ggttaccatg gtgtcagtgc tggaggatct gattggcaag cttaccagtc
1261 ttcagctgca acacctgttt atgatcctgg cctcaccaag gtatgtggac cgagtgactg
1321 aattcctcca gcaaaagctg aagcagtccc agctgctggc tttgaagaaa gagctgatgg
1381 tgcagaagca gcaggaggca cttgaggagc aggcggctct ggagcctaag ctggacctgc
1441 tactggagaa gaccaaggag ctgcagaagc tgattgaagc tgacatctcc aagaggtaca
1501 gcgggcgccc tgtgaacctg atgggaacct ctctgtgaca ccctccgtgt tcttgcctgc
1561 ccatcttctc cgcttttggg atgaagatga tagccagggc tgttgttttg gggcccttca
1621 aggcaaaaga ccaggctgac tggaagatgg aaagccacag gaaggaagcg gcacctgatg
1681 gtgatcttgg cactctccat gttctctaca agaagctgtg gtgattggcc ctgtggtcta
1741 tcaggcgaaa accacagatt ctccttctag ttagtatagc ggacttaata aaagaggaaa
1801 aaactcttaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//