LOCUS BC072412 2988 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nasal embryonic LHRH factor, mRNA (cDNA clone
MGC:90342 IMAGE:6165009), complete cds.
ACCESSION BC072412
VERSION BC072412.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2988)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2988)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: k Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2988
/db_xref="H-InvDB:HIT000264857"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90342 IMAGE:6165009"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2988
/gene="NELF"
/gene_synonym="RP11-48C7.1"
/db_xref="GeneID:26012"
/db_xref="HGNC:HGNC:29843"
/db_xref="MIM:608137"
CDS 218..1804
/gene="NELF"
/gene_synonym="RP11-48C7.1"
/codon_start=1
/product="nasal embryonic LHRH factor"
/protein_id="AAH72412.1"
/db_xref="GeneID:26012"
/db_xref="HGNC:HGNC:29843"
/db_xref="MIM:608137"
/translation="MGAAASRRRALRSEAMSSVAAKVRAARAFGEYLSQSHPENRNGA
DHLLADAYSGHDGSPEMQPAPQNKRRLSLVSNGCYEGSLSEEPSIRKPAGEGPQPRVY
TISGEPALLPSPEAEAIELAVVKGRRQRHPHHHSQPLRASPGGSREDVSRPCQSWAGS
RQGSKECPGCAQLAPGPTPRAFGLDQPPLPETSGRRKKLERMYSVDRVSDDIPIRTWF
PKENLFSFQTATTTMQAVFRGYAERKRRKRENDSASVIQRNFRKHLRMVGSRRVKAQT
FAERRERSFSRSWSDPTPMKADTSHDSRDSSDLQSSHCTLDEAFEDLDWDTEKGLEAV
ACDTEGFVPPKVMLISSKVPKAEYIPTIIRRDDPSIIPILYDHEHATFEDILEEIERK
LNVYHKGAKIWKMLIFCQGGPGHLYLLKNKVATFAKVEKEEDMIHFWKRLSRLMSKVN
PEPNVIHIMGCYILGNPNGEKLFQNLRTLMTPYRVTFESPLELSAQGKQMIETYFDFR
LYRLWKSRQHSKLLDFDDVL"
BASE COUNT 564 a 996 c 930 g 498 t
ORIGIN
1 ctcccgggag cggcggcacg cgcggagcgc cgggtgcggc catgcgggga ccgggcccga
61 ccccgagccc gaccccgagc ccaagcccga gccggagccc gagcgagacc ccgagcccga
121 gcccgagcgc gacccccggt gcggcgcggc taccccggcg gaggcggcgg gcgcggggcg
181 cgctctgagg cccgggggat gcgccgccgc ctcgaccatg ggcgccgccg cctccaggag
241 gagggcgctg aggagcgagg ccatgtcctc ggtggcggcc aaagtgcgag cagcccgagc
301 gtttggagag tacctgtccc agagtcaccc tgagaaccgc aacggcgcag atcacctgct
361 ggctgatgcc tactctggcc acgacgggtc ccccgagatg cagccggccc cccagaacaa
421 gcgccgcctg tccctcgtct ccaacggctg ctacgagggc agcctctcag aggagcccag
481 cattaggaag cccgcaggcg agggccctca gcctcgagtg tacaccatct ctggggagcc
541 tgccctgctg cccagccctg aggcggaggc cattgagctg gcggtggtga aggggcggcg
601 gcagcggcac cctcaccatc acagccagcc cctgcgcgcc agccctggtg gcagccggga
661 ggacgtcagc aggccctgcc agagctgggc gggcagccgc cagggctcca aggagtgccc
721 cggatgtgcc cagctggctc ctggccccac ccctcgggcc tttgggctgg accagccacc
781 tctgcctgag acctccggtc gccgcaagaa gctggagagg atgtacagcg ttgaccgtgt
841 gtctgacgac atccctattc gtacctggtt ccccaaggaa aatcttttca gcttccagac
901 agcaaccaca actatgcaag cggtgttcag gggctacgcg gagaggaagc gccggaaacg
961 ggagaatgat tccgcgtctg taatccagag gaacttccgc aaacacctgc gcatggtcgg
1021 cagccggagg gtgaaggccc agacgttcgc tgagcggcgc gagcggagct tcagccggtc
1081 ctggagcgac cccaccccca tgaaagccga cacttcccac gactcccgag acagcagtga
1141 cctgcagagc tcccactgca cgctggacga ggccttcgag gacctggact gggacactga
1201 gaagggcctg gaggctgtgg cctgcgacac cgaaggcttc gtgccaccaa aggtcatgct
1261 catttcctcc aaggtgccca aggctgagta catccccact atcatccgcc gggatgaccc
1321 ctccatcatc cccatcctct acgaccatga gcacgcaacc ttcgaggaca tccttgagga
1381 gatagagagg aagctgaacg tctaccacaa gggagccaag atctggaaaa tgctgatttt
1441 ctgccaggga ggtcctggac acctctatct cctcaagaac aaggtggcca cctttgccaa
1501 agtggagaag gaagaggaca tgattcactt ctggaagcgg ctgagccgcc tgatgagcaa
1561 agtgaaccca gagccgaacg tcatccacat catgggctgc tacattctgg ggaaccccaa
1621 tggagagaag ctgttccaga acctcaggac cctcatgact ccttataggg tcaccttcga
1681 gtcacccctg gagctctcag cccaagggaa gcagatgatc gagacgtact ttgacttccg
1741 gttgtatcgc ctgtggaaga gccgccagca ctcgaagctg ctggactttg acgacgtcct
1801 gtgaggggca gaggcctccg cccagtcacc atcaggccac tccctctgca ccgggacctg
1861 gggctgggcc gcctcgtgct ccccgggact gtgtggctcc ggtctcgcct ggagccactt
1921 cagggcacct cagacgttgc tcaggttccc cctgtgggtt ccggtcctcg ctgcacccgt
1981 ggccgcagag gctgcagtcc ctgggggccg ggaggatccc gccctgtggc ccgtggatgc
2041 tcagcggcca ggcactgacc tgccatgcct cgcctggagg ctcagctgtg ggcatccctc
2101 catggggttc atagaaataa gtgcaatttc tacacccccg aaacaattca aagggaagca
2161 gcatttcttg ttaactagtt aagcactatg ctgctagtta cagtgtaggc accccggccc
2221 agcagcccag cagcccacat gtgttcagga ccctccctgc ccaccccctc cctgccgtat
2281 cgatcaccag caccagggtg gcccgtgtgc gtggggccag cgtcgccggg ctgcccagcc
2341 tggctctgtc tacactggcc gagtctctgg gtctgtctac actggccgag tctccgactg
2401 tctgtgcttt cacttacact cctcttgcca ccccccatcc ctgcttactt agacctcagc
2461 cggcgccgga cccggtaggg gcagtctggg cagcaggaag gaagggcgca gcgtcccctc
2521 cttcagagga ggctctgggt ggggcctgct ccccatcccc ccaagcccac ccagcactct
2581 cattgctgct gttgagttca gcttttacca gcctcagtgt ggaggctcca tcccagcaca
2641 caggcctggg gcttggcagg ggcccagctg gggctgggcc ctgggttttg agaaactcgc
2701 tggcaccaca gtgggcccct ggacccggcc gcgcagctgg tggactgtag gggctcctga
2761 ctgggcacag gagctcccag cttttgtcca cggccagcag gatgggctgt cgtgtatata
2821 gctggggcga gggggcaggc cccccttgtg cagagccagg ggtctgaggg cacctggctg
2881 tgttcccagc tgagggaggg ctggggcggg ggccgggctt ggaacgatgt acgataccct
2941 catagtgacc attaaacctg atcctccacc gcgaaaaaaa aaaaaaaa
//