LOCUS BC072023 2974 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens transcription factor 7 (T-cell specific, HMG-box), mRNA (cDNA clone MGC:88737 IMAGE:6292932), complete cds. ACCESSION BC072023 VERSION BC072023.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2974) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2974) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CGAP (Stanford) cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: k Column: 20. FEATURES Location/Qualifiers source 1..2974 /db_xref="H-InvDB:HIT000264826" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88737 IMAGE:6292932" /tissue_type="Liver, hepatocellular carcinoma" /clone_lib="NIH_MGC_100" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..2974 /gene="TCF7" /gene_synonym="MGC47735" /gene_synonym="TCF-1" /db_xref="GeneID:6932" /db_xref="HGNC:HGNC:11639" /db_xref="MIM:189908" CDS 132..1286 /gene="TCF7" /gene_synonym="MGC47735" /gene_synonym="TCF-1" /codon_start=1 /product="transcription factor 7 (T-cell specific, HMG-box)" /protein_id="AAH72023.1" /db_xref="GeneID:6932" /db_xref="HGNC:HGNC:11639" /db_xref="MIM:189908" /translation="MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGP ERDLAELKSSLVNESEGAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEP LEDGLKAPECTSGMYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQL SLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSL MLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAF MLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYP GWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL" BASE COUNT 717 a 956 c 777 g 524 t ORIGIN 1 gtcagcccgc gctccgcccg ccgcgatccg agctcggagg ttcggactcc gggctcgccg 61 ccccccgggc cggctccgcg ccccgcactc ccggcgccca gcgccccgcg ccccggcggg 121 cggagcgcac catgccgcag ctggactccg gcgggggcgg cgcgggcggc ggcgacgacc 181 tcggcgcgcc ggacgagctg ctggccttcc aggatgaagg cgaggagcag gacgacaaga 241 gccgcgacag cgccgccggt cccgagcgcg acctggccga gctcaagtcg tcgctcgtga 301 acgagtccga gggcgcggcc ggcggcgcag ggatcccggg ggtcccgggg gccggcgccg 361 gggcccgcgg cgaggccgag gctctcgggc gggaacacgc tgcgcagaga ctcttcccgg 421 acaaacttcc agagcccctg gaggacggcc tgaaggcccc ggagtgcacc agcggcatgt 481 acaaagagac cgtctactcc gccttcaatc tgctcatgca ttacccaccc ccctcgggag 541 cagggcagca cccccagccg cagcccccgc tgcacaaggc caatcagccc ccccacggtg 601 tcccccaact ctctctctac gaacatttca acagcccaca tcccacccct gcacctgcgg 661 acatcagcca gaagcaagtt cacaggcctc tgcagacccc tgacctctct ggcttctact 721 ccctgacctc aggcagcatg gggcagctcc cccacactgt gagctggttc acccacccat 781 ccttgatgct aggttctggt gtacctggtc acccagcagc catcccccac ccggccattg 841 tgcccccctc agggaagcag gagctgcagc ccttcgaccg caacctgaag acacaagcag 901 agtccaaggc agagaaggag gccaagaagc caaccatcaa gaagcccctc aatgccttca 961 tgctgtacat gaaggagatg agagccaagg tcattgcaga gtgcacactt aaggagagcg 1021 ctgccatcaa ccagatcctg ggccgcaggt ggcacgcgct gtcgcgagaa gagcaggcca 1081 agtactatga gctggcccgc aaggagaggc agctgcacat gcagctatac ccaggctggt 1141 cagcgcggga caactacggg aagaagaaga ggcggtcgag ggaaaagcac caagaatcca 1201 ccacaggagg aaaaagaaat gcattcggta cttacccgga gaaggccgct gccccagccc 1261 cgttccttcc gatgacagtg ctctaggctg ccccgggtcc ccagctcccc aggactcacc 1321 ctcataccat ctgctgcccc gcttccccac agaactgctt actagccctg cggagccggc 1381 acctacatcc ccaggtctct ccactgctct cagcctccca accccagggc ccccacaggc 1441 cccccgcagc accctgcaga gcacacaggt acagcaacag gaatctcaga gacaggtggc 1501 ctagcaggca caggacacct ggccgcctcc aggagcctac cccctgaaag tgacagagac 1561 ccagatctca tggaaactgg ccaggggtcc tgttaacgtc atctcagggt ccagaccctg 1621 aagatttcag aggctgcaga acttctgcct gaacctgggg tcatcgattc aaactgctcc 1681 aagtggtggg aatcagatct gtcttgatgt gtcatctaat taagggaatc ccttgtacct 1741 atggctgcct gcatctattc tttgtaccat ctgtcttgcc agccagaagc ctctgcctcc 1801 ctagcttttc tgctataggt cagagatggg ctgaactgag cctagctacc ttctctaccc 1861 atctccccca tcccccactg ccacaccctc cccattcaga cacttcatgg accaagaatg 1921 agctggtttg tcaaacaaca tgtgagcatg gtcacaagca caaagctcaa gatgacagct 1981 cttctaagga aatggagaag ctctgtttat aaaaacaaaa acaaaaccag ctgctactca 2041 taagttggac cagaggaagc cccttactat gatctcagga gcttgcaaga agcaggaagg 2101 ggaatggaat aggttaagtt taggcctatc aacctaagca acagaaataa tctgacacta 2161 ccttatcagg caaattgggg aggggagggt gtatctagct ctagttcaaa ttatttgaaa 2221 gtgttccctg agaaacccac cagcctaaga agctctggcc ccaggcttgt cactagcagc 2281 tgcagtcaac agttcaaaga agtcatggcc caaatccagt gtgcacccct ccccattcac 2341 agagcctttt tcacaattcc atttccagtt catctatggc agtccagcca gctcctgggc 2401 agcttgagag ggcaaaccca aaacctcatg acagccagag cctgtctttc agcattcagt 2461 ccgcctggcc ggctccagtt tccccatggg gctgcgggac agaggaccat tacaactaga 2521 tcaaggagcc cagaaaacct ccagtagtgg acaacaggtt ttcaccatag cctacgttaa 2581 cccatttttg agccaagctt caaccctcag ccttgaaaaa caagtcttta atttaatttt 2641 tgttttttgc ctaaatccaa agaaaaaggg ctgtcgggcc aggcgcggtg gctcacgcct 2701 gtaatcccag cactttggca ggccgaggca ggtggatcac ctgacgtcag tagtttgaga 2761 ccagcctggc caacatggtg aaaccctgta tctactaaaa atacaaaaat tagccggacg 2821 tggtggtgcg cgcatgtaat cccagctact cgggaggctg aggcggaaga atcccttgaa 2881 cccgggaggc ggaggttcca gtgagccgag atggcgctat tgcactccag tctgggtaac 2941 agggagactg catctcaaaa aaaaaaaaaa aaaa //