LOCUS BC072017 1462 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens keratin 18, mRNA (cDNA clone MGC:88728 IMAGE:6251574), complete cds. ACCESSION BC072017 VERSION BC072017.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1462) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1462) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: j Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40354194. FEATURES Location/Qualifiers source 1..1462 /db_xref="H-InvDB:HIT000264820" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88728 IMAGE:6251574" /tissue_type="Pancreas, ductal carcinoma" /clone_lib="NIH_MGC_110" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1462 /gene="KRT18" /gene_synonym="CYK18" /gene_synonym="K18" /db_xref="GeneID:3875" /db_xref="HGNC:HGNC:6430" /db_xref="MIM:148070" CDS 46..1338 /gene="KRT18" /gene_synonym="CYK18" /gene_synonym="K18" /codon_start=1 /product="keratin 18" /protein_id="AAH72017.1" /db_xref="GeneID:3875" /db_xref="HGNC:HGNC:6430" /db_xref="MIM:148070" /translation="MSFTTRSTFSTNYRSLGSVQAPSYGARPVSSAASVYAGAGGSGS RISVSRSTSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDRLASYLDRVRSLE TENRRLESKIREHLEKKGPQVRDWSHYFKIIEDLRAQIFANTVDNARIVLQIDNARLA ADDFRVKYETELAMRQSVENDIHGLRKVIDDTNITRLQLETEIEALKEELLFMKKNHE EEVKGLQAQIASSGLTVEVDAPKSQDLAKIMADIRAQYDELARKNREELDKYWSQQIE ESTTVVTTQSAEVGAAETTLTELRRTVQSLEIDLDSMRNLKASLENSLREVEARYALQ MEQLNGILLHLESELAQTRAEGQRQAQEYEALLNIKVKLEAEIATYRRLLEDGEDFNL GDALDSSNSMQTIQKTTTRRIVDGKVVSETNDTKVLRH" BASE COUNT 410 a 390 c 424 g 238 t ORIGIN 1 cgtccgcaaa gcctgagtcc tgtcctttct ctctccccgg acagcatgag cttcaccact 61 cgctccacct tctccaccaa ctaccggtcc ctgggctctg tccaggcgcc cagctacggc 121 gcccggccgg tcagcagcgc ggccagcgtc tatgcaggcg ctgggggctc tggttcccgg 181 atctccgtgt cccgctccac cagcttcagg ggcggcatgg ggtccggggg cctggccacc 241 gggatagccg ggggtctggc aggaatggga ggcatccaga acgagaagga gaccatgcaa 301 agcctgaacg accgcctggc ctcttacctg gacagagtga ggagcctgga gaccgagaac 361 cggaggctgg agagcaaaat ccgggagcac ttggagaaga agggacccca ggtcagagac 421 tggagccatt acttcaagat catcgaggac ctgagggctc agatcttcgc aaatactgtg 481 gacaatgccc gcatcgttct gcagattgac aatgcccgtc ttgctgctga tgactttaga 541 gtcaagtatg agacagagct ggccatgcgc cagtctgtgg agaacgacat ccatgggctc 601 cgcaaggtca ttgatgacac caatatcaca cgactgcagc tggagacaga gatcgaggct 661 ctcaaggagg agctgctctt catgaagaag aaccacgaag aggaagtaaa aggcctacaa 721 gcccagattg ccagctctgg gttgaccgtg gaggtagatg cccccaaatc tcaggacctc 781 gccaagatca tggcagacat ccgggcccaa tatgacgagc tggctcggaa gaaccgagag 841 gagctagaca agtactggtc tcagcagatt gaggagagca ccacagtggt caccacacag 901 tctgctgagg ttggagctgc tgagacgacg ctcacagagc tgagacgtac agtccagtcc 961 ttggagatcg acctggactc catgagaaat ctgaaggcca gcttggagaa cagcctgagg 1021 gaggtggagg cccgctacgc cctacagatg gagcagctca acgggatcct gctgcacctt 1081 gagtcagagc tggcacagac ccgggcagag ggacagcgcc aggcccagga gtatgaggcc 1141 ctgctgaaca tcaaggtcaa gctggaggct gagatcgcca cctaccgccg cctgctggaa 1201 gatggcgagg actttaatct tggtgatgcc ttggacagca gcaactccat gcaaaccatc 1261 caaaagacca ccacccgccg gatagtggat ggcaaagtgg tgtctgagac caatgacacc 1321 aaagttctga ggcattaagc cagcagaagc agggtaccct ttggggagca ggaggccaat 1381 aaaaagttca gagttcattg gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1441 aaaaaaaaaa aaaaaaaaaa aa //