LOCUS BC071953 2735 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 82, mRNA (cDNA clone
MGC:88643 IMAGE:5431506), complete cds.
ACCESSION BC071953
VERSION BC071953.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2735)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2735)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: f Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48976053.
FEATURES Location/Qualifiers
source 1..2735
/db_xref="H-InvDB:HIT000264760"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88643 IMAGE:5431506"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2735
/gene="C9orf82"
/gene_synonym="FLJ13657"
/gene_synonym="RP11-337A23.1"
/db_xref="GeneID:79886"
/db_xref="HGNC:HGNC:25834"
CDS 13..1098
/gene="C9orf82"
/gene_synonym="FLJ13657"
/gene_synonym="RP11-337A23.1"
/codon_start=1
/product="chromosome 9 open reading frame 82"
/protein_id="AAH71953.1"
/db_xref="GeneID:79886"
/db_xref="HGNC:HGNC:25834"
/translation="MTGKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCG
SAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQE
TKYILPTLEKELFLAEHSDLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQ
KMLPDVLKNCSIEEIKKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSD
LVSQQDICIDSASSVRENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAA
PEAPENTVQSEAGQINDLEKDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQ
QLELLELEMRARAIKALMKAGDIKKPA"
BASE COUNT 892 a 434 c 561 g 848 t
ORIGIN
1 agcagaggga tcatgacggg gaaaaagtcc tcccgggaga aacggcgcaa acgtagcagt
61 caggaggcgg ccgcagcgct cgcggccccg gacatcgtac ccgcgttggc cagcggcagc
121 agtggaagca ctagcggctg cgggagcgcc gggggctgcg ggagcgtcag ctgctgtggg
181 aacgccaatt ttagtggaag tgtcaccggc ggtgggagcg gcggcagctg ttggggcggg
241 agcagcgtgg agcgcagcga gcgccggaag cggaggagta ccgactcttc cagcgtctcg
301 ggctccttgc agcaggaaac taaatatatt ttgccaactt tggaaaaaga attattcttg
361 gcagagcaca gtgaccttga agaaggtgga ctggacctga ctgtgtcatt gaaaccagtt
421 agtttctata tatcagacaa aaaagaaatg cttcagcagt gcttctgtat tataggagag
481 aaaaagttac agaagatgct tcctgatgtg ttaaagaact gttcaataga agaaattaaa
541 aaactatgcc aggaacagtt agagctcctg tctgaaaaaa aaattttgaa gattcttgag
601 ggtgacaatg gaatggactc tgatatggaa gaggaagcag atgatggttc taagatggga
661 tctgatttag tcagtcagca agacatctgt atagattctg cttcatccgt gagagagaat
721 aagcaacctg aaggtttgga attaaaacaa ggaaaagggg aagatagtga tgtactcagt
781 ataaatgcag atgcttatga cagcgacata gaaggcccat gcaacgaaga agcagctgct
841 cccgaggcac cagaaaatac agtccaaagt gaagctggtc agataaatga cctggagaaa
901 gacattgaga aaagtgtgaa tgagattcta ggactggcag agtctagccc aaacgaaccc
961 aaagcagcca ccctggctgt tcctccacca gaagatgttc aaccttctgc acagcaactg
1021 gagctgctag aacttgagat gagggcaaga gcgattaaag ccctaatgaa agctggtgat
1081 ataaaaaagc cagcctaggt atttaacttg attttgaatt ttaggtatgt ttgaacaaag
1141 ccacatcatt taattttgta tctaaaattt atttggggtc ttatatgtta tttctcatgt
1201 aacccttatt aggactcatt ttagccctaa attacctgtg gctgtttctt tttatttttt
1261 tgactacttt tatattataa atgtgtgtta ctgtcttatg aattcatggc aatatagttg
1321 gatagcctgg atactttgtt agatgagtat ttagctgtgt ctgcaaatct taaaagccat
1381 tagcaaagag tcgtggtatt tttttcttta tttttaaatg tttgggcacc aaacctaaaa
1441 gcaaaagatt gacgaagcat gtttctctta aggctacttg tattttacaa tacaatatta
1501 aattatttaa tttgagaaat ttagttttgc ttatatgcac tttttaaata tatactattt
1561 tgaagattcc ttatgtaaat gcaaatttcc tagttaaaac cgaataacag agatctgaaa
1621 tgactgagaa aaactttttt attaaaggaa ggaattaatt taaggcaatt tttaactatg
1681 tagaactaat tgcccatgtt taattatagc agacacgcca ttctaacagg tatttgatac
1741 cattggatgc attattctag gttttttctt taataaaaat ggaacaagtt ttcatttaca
1801 ttccaagctg tcaggaaatg aagaatattt tattatctag gattttatct gatgtagttg
1861 cttaaagatc tgatgtgcta taattccatg aatcagaaat aataaaatgc tatcattctg
1921 gatctgaaga cttttgatac tttttcaaaa gcaaaattaa tttcaggaac ctttgataag
1981 ttgttgttat aattaatcta attttgtata gtttttgtaa ataaattacc atccttccac
2041 aattagggat gcttttatcc ccccatcact aattgcagtt gtttgatacc aaaataaatt
2101 tacgtagaga tccttaactt aaaataaatt aattttttca aaaaacataa atctggaact
2161 gttgtttcta tatttgataa caaatacagt atattttatt tataagccat ggtctactga
2221 tactgtatga ggactttcct tatatataaa agttgcaggg attgtgtttt attagctgct
2281 ttaattatgt taattttaga gagtttttaa atggaaatag aggacattta tgaaacgctg
2341 gaattgcagt tacaaattct ttttgttgtt gttgttcctg aacatgcctt ggaataattc
2401 taccattttt tccccctcca taaatctttc taataaagca tagaaaaagc ctatatgatt
2461 ttaaatgctt ctcttaagct ggtaaacaga tttgagttat gagttcattg ttattgcttc
2521 aagatgaaaa gacagtgata taatttttct atttcaactt aaaagtaata gttaatatgc
2581 taaagtagta cagaataaac tttattgctg cttactaact acaaaatact gtagatggca
2641 tctgtatgat taaacatata aagtaaaaca ggtctgaggg ctttgtagat gattaaagtc
2701 tccaccttca tgaaaaaaaa aaaaaaaaaa aaaaa
//