LOCUS BC071904 1641 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1b, mRNA (cDNA clone MGC:88583
IMAGE:6089096), complete cds.
ACCESSION BC071904
VERSION BC071904.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1641)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1641)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17986282.
FEATURES Location/Qualifiers
source 1..1641
/db_xref="H-InvDB:HIT000264715"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88583 IMAGE:6089096"
/tissue_type="Skin, melanoma, melanotic"
/clone_lib="NIH_MGC_112"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1641
/gene="TUBA1B"
/gene_synonym="K-ALPHA-1"
/db_xref="GeneID:10376"
/db_xref="HGNC:HGNC:18809"
/db_xref="MIM:602530"
CDS 87..1442
/gene="TUBA1B"
/gene_synonym="K-ALPHA-1"
/codon_start=1
/product="tubulin, alpha 1b"
/protein_id="AAH71904.1"
/db_xref="GeneID:10376"
/db_xref="HGNC:HGNC:18809"
/db_xref="MIM:602530"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT
IKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEE
Y"
BASE COUNT 387 a 447 c 401 g 406 t
ORIGIN
1 cttacctcga ctcttagctt gtcggggacg gtaaccggga cccggtgtct gctcctgtcg
61 ccttcgcctc ctaatcccta gccactatgc gtgagtgcat ctccatccac gttggccagg
121 ctggtgtcca gattggcaat gcctgctggg agctctactg cctggaacac ggcatccagc
181 ccgatggcca gatgccaagt gacaagacca ttgggggagg agatgactcc ttcaacacct
241 tcttcagtga gacgggcgct ggcaagcacg tcccccgggc tgtgtttgta gacttggaac
301 ccacagtcat tgatgaagtt cgcactggca cctaccgcca gctcttccac cctgagcagc
361 tcatcacagg caaggaagat gctgccaata actatgcccg agggcactac accattggca
421 aggagatcat tgaccttgtg ttggaccgaa ttcgcaagct ggctgaccag tgcaccggtc
481 ttcagggctt cttggttttc cacagctttg gtgggggaac tggttctggg ttcacctccc
541 tgctcatgga acgtctctca gttgattatg gcaagaagtc caagctggag ttctccattt
601 acccagcacc ccaggtttcc acagctgtag ttgagcccta caactccatc ctcaccaccc
661 acaccaccct ggagcactct gattgtgcct tcatggtaga caatgaggcc atctatgaca
721 tctgtcgtag aaacctcgat atcgagcgcc caacctacac taaccttaac cgccttatta
781 gccagattgt gtcctccatc actgcttccc tgagatttga tggagccctg aatgttgacc
841 tgacagaatt ccagaccaac ctggtgccct acccccgcat ccacttccct ctggccacat
901 atgcccctgt catctctgct gagaaagcct accatgaaca gctttctgta gcagagatca
961 ccaatgcttg ctttgagcca gccaaccaga tggtgaaatg tgaccctcgc catggtaaat
1021 acatggcttg ctgcctgttg taccgtggtg acgtggttcc caaagatgtc aatgctgcca
1081 ttgccaccat caaaaccaag cgcagcatcc agtttgtgga ttggtgcccc actggcttca
1141 aggttggcat caactaccag cctcccactg tggtgcctgg tggagacctg gccaaggtac
1201 agagagctgt gtgcatgctg agcaacacca cagccattgc tgaggcctgg gctcgcctgg
1261 accacaagtt tgacctgatg tatgccaagc gtgcctttgt tcactggtac gtgggtgagg
1321 ggatggagga aggcgagttt tcagaggccc gtgaagatat ggctgccctt gagaaggatt
1381 atgaggaggt tggtgtggat tctgttgaag gagagggtga ggaagaagga gaggaatact
1441 aattatccat tccttttggc cctgcagcat gtcatgctcc cagaatttca gcttcagctt
1501 aactgacaga cgttaaagct ttctggttag attgttttca cttggtgatc atgtcttttc
1561 catgtgtacc tgtaatattt ttccatcata tctcaaagta aagtcattaa catcaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa a
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