LOCUS BC071860 1266 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lactate dehydrogenase B, mRNA (cDNA clone MGC:88529
IMAGE:4902461), complete cds.
ACCESSION BC071860
VERSION BC071860.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1266)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1266)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: e Column: 19.
FEATURES Location/Qualifiers
source 1..1266
/db_xref="H-InvDB:HIT000264673"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88529 IMAGE:4902461"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1266
/gene="LDHB"
/gene_synonym="LDH-H"
/gene_synonym="TRG-5"
/db_xref="GeneID:3945"
/db_xref="HGNC:HGNC:6541"
/db_xref="MIM:150100"
CDS 44..1048
/gene="LDHB"
/gene_synonym="LDH-H"
/gene_synonym="TRG-5"
/codon_start=1
/product="lactate dehydrogenase B"
/protein_id="AAH71860.1"
/db_xref="GeneID:3945"
/db_xref="HGNC:HGNC:6541"
/db_xref="MIM:150100"
/translation="MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKS
LADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQ
EGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVI
GSGCNLDSARFRYLMAEKLGIHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPE
MGTDNDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVST
MVKGMYGIENEVFLSLPCILNARGLTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
"
BASE COUNT 380 a 225 c 309 g 352 t
ORIGIN
1 gactgttaca gaggtctcca gagccttctc tctcctgtgc aaaatggcaa ctcttaagga
61 aaaactcatt gcaccagttg cggaagaaga ggcaacagtt ccaaacaata agatcactgt
121 agtgggtgtt ggacaagttg gtatggcgtg tgctatcagc attctgggaa agtctctggc
181 tgatgaactt gctcttgtgg atgttttgga agataagctt aaaggagaaa tgatggatct
241 gcagcatggg agcttatttc ttcagacacc taaaattgtg gcagataaag attattctgt
301 gaccgccaat tctaagattg tagtggtaac tgcaggagtc cgtcagcaag aaggggagag
361 tcggctcaat ctggtgcaga gaaatgttaa tgtcttcaaa ttcattattc ctcagatcgt
421 caagtacagt cctgattgca tcataattgt ggtttccaac ccagtggaca ttcttacgta
481 tgttacctgg aaactaagtg gattacccaa acaccgcgtg attggaagtg gatgtaatct
541 ggattctgct agatttcgct accttatggc tgaaaaactt ggcattcatc ccagcagctg
601 ccatggatgg attttggggg aacatggcga ctcaagtgtg gctgtgtgga gtggtgtgaa
661 tgtggcaggt gtttctctcc aggaattgaa tccagaaatg ggaactgaca atgatagtga
721 aaattggaag gaagtgcata agatggtggt tgaaagtgcc tatgaagtca tcaagctaaa
781 aggatatacc aactgggcta ttggattaag tgtggctgat cttattgaat ccatgttgaa
841 aaatctatcc aggattcatc ccgtgtcaac aatggtaaag gggatgtatg gcattgagaa
901 tgaagtcttc ctgagccttc catgtatcct caatgcccgg ggattaacca gcgttatcaa
961 ccagaagcta aaggatgatg aggttgctca gctcaagaaa agtgcagata ccctgtggga
1021 catccagaag gacctaaaag acctgtgact agtgagctct aggctgtaga aatttaaaaa
1081 ctacaatgtg attaactcga gcctttagtt ttcatccatg tacatggatc acagtttgct
1141 ttgatcttct tcaatatgtg aatttgggct cacagaatca aagcctatgc ttggtttaat
1201 gcttgcaatc tgagctcttg aacaaataaa attaactatt gtagtgtgaa aaaaaaaaaa
1261 aaaaaa
//