LOCUS BC071778 1830 bp mRNA linear HUM 15-JUN-2004 DEFINITION Homo sapiens nuclear receptor subfamily 1, group H, member 4, mRNA (cDNA clone IMAGE:4606016), partial cds. ACCESSION BC071778 VERSION BC071778.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1830) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1830) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 57 Row: c Column: 20. FEATURES Location/Qualifiers source 1..1830 /db_xref="H-InvDB:HIT000264597" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4606016" /tissue_type="Kidney" /clone_lib="NIH_MGC_75" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene <1..1830 /gene="NR1H4" /gene_synonym="BAR" /gene_synonym="FXR" /gene_synonym="HRR-1" /gene_synonym="HRR1" /gene_synonym="RIP14" /db_xref="GeneID:9971" /db_xref="MIM:603826" CDS <1..1429 /gene="NR1H4" /gene_synonym="BAR" /gene_synonym="FXR" /gene_synonym="HRR-1" /gene_synonym="HRR1" /gene_synonym="RIP14" /codon_start=2 /product="NR1H4 protein" /protein_id="AAH71778.1" /db_xref="GeneID:9971" /db_xref="MIM:603826" /translation="IQISPHCSCTPSGFFMEMMSMKPAKGVLTEQVAGPLGQNLEVEP YSQYSNVQFPQVQPQISSSSYYSNLGFYPQQPEEWYSPGIYELRRMPAETLYQGETEV AEMPVTKKPRMGASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVY KCKNGGNCVMDMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQH ADQTVNEDSEGRDLRQVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNKI LKEELSAEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLR SAEIFNKKLPSGHSDLLEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIV ILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHH AEMLMSWRVNDHKFTPLLCEIWDVQ" BASE COUNT 589 a 347 c 398 g 496 t ORIGIN 1 aattcaaatt agtcctcact gcagctgtac gccgtcagga tttttcatgg aaatgatgag 61 tatgaagccc gcgaaaggtg ttttaacaga acaagtggca ggtcctctgg gacagaacct 121 ggaagtggaa ccatactcgc aatacagcaa tgttcagttt ccccaagttc aaccacagat 181 ttcctcgtca tcctattatt ccaacctggg tttctacccc cagcagcctg aagagtggta 241 ctctcctgga atatatgaac tcaggcgtat gccagctgag actctctacc agggagaaac 301 tgaggtagca gagatgcctg taacaaagaa gccccgcatg ggcgcgtcag cagggaggat 361 caaaggggat gagctgtgtg ttgtttgtgg agacagagcc tctggatacc actataatgc 421 actgacctgt gaggggtgta aaggtttctt caggagaagc attaccaaaa acgctgtgta 481 caagtgtaaa aacgggggca actgtgtgat ggatatgtac atgcgaagaa agtgtcaaga 541 gtgtcgacta aggaaatgca aagagatggg aatgttggct gaatgtatgt atacaggctt 601 gttaactgaa attcagtgta aatctaagcg actgagaaaa aatgtgaagc agcatgcaga 661 tcagaccgtg aatgaagaca gtgaaggtcg tgacttgcga caagtgacct cgacaacaaa 721 gtcatgcagg gagaaaactg aactcacccc agatcaacag actcttctac attttattat 781 ggattcatat aacaaacaga ggatgcctca ggaaataaca aataaaattt taaaagaaga 841 actcagtgca gaagaaaatt ttctcatttt gacggaaatg gcaaccaatc atgtacaggt 901 tcttgtagaa ttcacaaaaa agctaccagg atttcagact ttggaccatg aagaccagat 961 tgctttgctg aaagggtctg cggttgaagc tatgttcctt cgttcagctg agattttcaa 1021 taagaaactt ccgtctgggc attctgacct attggaagaa agaattcgaa atagtggtat 1081 ctctgatgaa tatataacac ctatgtttag tttttataaa agtattgggg aactgaaaat 1141 gactcaagag gagtatgctc tgcttacagc aattgttatc ctgtctccag atagacaata 1201 cataaaggat agagaggcag tagagaagct tcaggagcca cttcttgatg tgctacaaaa 1261 gttgtgtaag attcaccagc ctgaaaatcc tcaacacttt gcctgtctcc tgggtcgcct 1321 gactgaatta cggacattca atcatcacca cgctgagatg ctgatgtcat ggagagtaaa 1381 cgaccacaag tttaccccac ttctctgtga aatctgggac gtgcagtgat ggggattaca 1441 ggggaggggt ctagctcctt tttctctctc atattaatct gatgtataac tttcctttat 1501 ttcacttgta cccagtttca ctcaagaaat cttgatgaat atttatgttg taattacatg 1561 tgtaacttcc acaactgtaa atattgggct agatagaaca actttctcta cattgtgttt 1621 taaaaggctc cagggaatcc tgcattctaa ttggcaagcc ctgtttgcct aattaaattg 1681 attgttactt caattctatc tgttgaacta gggaaaatct cattttgctc atcttaccat 1741 attgcatata ttttattaaa gagttgtatt caatcttggc aataaagcaa acataatgac 1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //