LOCUS BC071746 1035 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens C-type lectin domain family 7, member A, mRNA (cDNA
clone MGC:88224 IMAGE:4690475), complete cds.
ACCESSION BC071746
VERSION BC071746.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1035)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1035)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: f Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37675386.
FEATURES Location/Qualifiers
source 1..1035
/db_xref="H-InvDB:HIT000264566"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88224 IMAGE:4690475"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1035
/gene="CLEC7A"
/gene_synonym="BGR"
/gene_synonym="DECTIN1"
/db_xref="GeneID:64581"
/db_xref="HGNC:HGNC:14558"
/db_xref="MIM:606264"
CDS 102..500
/gene="CLEC7A"
/gene_synonym="BGR"
/gene_synonym="DECTIN1"
/codon_start=1
/product="CLEC7A protein"
/protein_id="AAH71746.1"
/db_xref="GeneID:64581"
/db_xref="HGNC:HGNC:14558"
/db_xref="MIM:606264"
/translation="MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGSCAASPPWR
LIAVILGILCLVILVIAVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQC
WQLGSNLLKIDSSNELVSVDFCYDYLWCVS"
BASE COUNT 303 a 209 c 211 g 312 t
ORIGIN
1 gatttgactc agagattctc ttttgtccac agacagtcat ctcaggagca gaaagaaaag
61 agctcccaaa tgctatatct attcaggggc tctcaagaac aatggaatat catcctgatt
121 tagaaaattt ggatgaagat ggatatactc aattacactt cgactctcaa agcaatacca
181 ggatagctgt tgtttcagag aaaggatcgt gtgctgcatc tcctccttgg cgcctcattg
241 ctgtaatttt gggaatccta tgcttggtaa tactggtgat agctgtggtc ctgggtacca
301 tgggggttct ttccagccct tgtcctccta attggattat atatgagaag agctgttatc
361 tattcagcat gtcactaaat tcctgggatg gaagtaaaag acaatgctgg caactgggct
421 ctaatctcct aaagatagac agctcaaatg aattggtaag tgtagacttc tgttatgatt
481 atctgtggtg tgtatcctga aggaagatag agggagattc caggtaatga caatttttcc
541 taaaatgaag tctttttttt tttttttttt gaggcggggt ctcactctgt tgcccaggct
601 ggagtgcagt gaagccgcga catcccgggc tcaagtgatc ctcccgcctc ggcttcctga
661 gtaggtggga ctacagggtg caccaccaca ctcgtctaat gtttttttgt atttttcata
721 gagacgaggt ttctccatgt catctgggct ggtctcaaaa tcctgggcac aagcgatctg
781 cctacctcga tctcccagtg ttgggattac aggtgtaagc caccacactt ggccaaaatt
841 catttttaat atctctataa ttataatcat agcatgcctt aagcacataa agtgcatagt
901 atatgctttt atttttaact aatttaaaaa actgtgtttc gccttaaaac aaatcctttc
961 aaacatactc catgtatgca tgactacaat aatcaggaca ctaccaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaa
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