LOCUS BC071736 1999 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens similar to BMS1-like, ribosome assembly protein, mRNA
(cDNA clone MGC:88084 IMAGE:5180577), complete cds.
ACCESSION BC071736
VERSION BC071736.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1999)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1999)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: h Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281482
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1999
/db_xref="H-InvDB:HIT000264556"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88084 IMAGE:5180577"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1999
/gene="LOC387693"
/db_xref="GeneID:387693"
CDS 187..420
/gene="LOC387693"
/codon_start=1
/product="LOC387693 protein"
/protein_id="AAH71736.1"
/db_xref="GeneID:387693"
/translation="METKDQKKQRKKNSGPKDEKKKKRHLQDLQLGDEEDAQKRNPKA
FAVQSAVWMARSFHRTQDLKTKSIVFQWLIELH"
BASE COUNT 541 a 395 c 425 g 638 t
ORIGIN
1 gacgagtctt tcttccagct ctaccctgaa agtcctccag gcaccggtct ttttttttct
61 gccttttgtt tccctcccgg cgagtcggcg cgacagtgaa tttccgtttc ccgcggtgtc
121 caagcggacc tgaggagttg cagctgtgag caggttagag ttacttgtta ttggtaaata
181 gccactatgg agactaagga ccagaagaaa caaagaaaga aaaacagtgg acccaaagat
241 gaaaagaaaa agaagcggca tctgcaggat ctccagctag gagacgaaga agatgcccag
301 aagagaaatc ccaaagcttt tgcagttcag tctgctgtgt ggatggctcg atcctttcac
361 aggactcagg atttgaagac aaaaagcatc gtattccagt ggttgatcga actccactag
421 agcccccacc aatagtggta gtggtgacgg ggcctccaaa gttggaaaga gcactttgat
481 ataatgcctc attcagaact tcattggcag aagttgactg agatcagagg ccctgtgatg
541 atcgtgtcag gtcaagggct cagaggtttg cagggccctc ctgggaagat ggggccccca
601 ggaaacacag ggacttctgg aattccagga cctaggggcc aaaaaggaga tcgtggggac
661 aattcagttg ctgaggctaa gctggccaac ttagagagaa agctatagag cctgagatca
721 gaactggacc acacgaagaa gcagacagga tctccgtatg ttgtccaggc tggtctttaa
781 ctcctgacct caagtgatcc tccccagtca gcctcccaaa gtgctgggat aacaggttca
841 tccctctctg tgccttggtt ttcatatttg gaaaatgacg aggaggattt aactagatta
901 tctctaaggt tgaatgggga aagaacattc ctggaatcac caggcaagaa gaggattgga
961 gagatggggt ctcactctgt tgcccacgct ggtctcaaac tcctggtctc aagcaattct
1021 cctgcctcag cctaccgaag ttctgagatt acaagtgtaa gccatcatac ccagcaccaa
1081 tctgtatctt ttaagtggaa catttactcc atttattatc aaggttaata ttgatatgtg
1141 atgttttgtt cctgtcatga taattgttac ccagttgctt tttagtctca attatgtaat
1201 tgctttatat aatctgtgag tttttcactt taatgtgctt ttatgatgag gagtattgtc
1261 cattcatttc catgtttaga actttaagca tttcttgtag tgctggtctt gtggtgacaa
1321 attccctttg catttgttgt atgggaaaaa ctttatttct ccttcattta tgcagcttag
1381 tttagcagga tacaaaattc ttggctggca ggatttttgt ttaagtagat taaacataag
1441 accccaatct cttctggctt gtaaggtttc tgctaagaag tccattgtta gtctgttagg
1501 ttttcctgta tagattagac atttctctct tgctgctttt aggatgtttt ccttcacatt
1561 gactttggat agtctgatga cgatatgcct ttatgaggtt tctcttgtaa agcatcttcc
1621 aggtgttctc tgagcatctc ctatctggat gtctaattct ctagcaagac cagggaagtt
1681 ttcctgaatt attccctcaa ataggttttc caagctttta attttttttc ttctccctca
1741 ggaatgtcta tatattgtat atttggtaac tttatgtaat tctatatttt tcaaagtctt
1801 tgttcatttt taaaaattta ttttttctgt atttctgtct gactaggtta attcaaatga
1861 ctggccttca ggctctgaaa ttatttcttc tgcttggtct agtcttttgc taaaagtttc
1921 aactatattt tatagttcct tcaataaatt tttatttcta gaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaa
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