LOCUS BC071721 1716 bp mRNA linear HUM 25-JUN-2004 DEFINITION Homo sapiens interferon regulatory factor 3, mRNA (cDNA clone MGC:88024 IMAGE:5494536), complete cds. ACCESSION BC071721 VERSION BC071721.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1716) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1716) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 166 Row: n Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4504724. FEATURES Location/Qualifiers source 1..1716 /db_xref="H-InvDB:HIT000264541" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88024 IMAGE:5494536" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1716 /gene="IRF3" /db_xref="GeneID:3661" /db_xref="MIM:603734" CDS 343..1626 /gene="IRF3" /codon_start=1 /product="IRF3 protein" /protein_id="AAH71721.1" /db_xref="GeneID:3661" /db_xref="MIM:603734" /translation="MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQ DAQQEDFGIFQAWAEATGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHD PHKIYEFVNSGVGDFSQPDTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSL AVAPEPCPQPLRSPSLDNPTPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQ TISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWR AGQWLWAQRLGHCHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTE GSGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGASSLENTVD LHISNSHPLSLTSDQYKAYLQDLVEGMDFQGPGES" BASE COUNT 358 a 486 c 561 g 311 t ORIGIN 1 cccacgcgtc cgctaccctg aaagtgggga tacttacttt cgatgatgtg ggggagggag 61 gaggtctata ctggcggaat tgagggagtg gagggtctgc actgaagacg ctggggaagg 121 atgtgccatg gatatgggaa ggaaccctag ctgattagag agcctctcgg gaggatggga 181 ggatgggaag aggaggtttc ctgtttgtac ccccgaaaat atgggtgaag gacctgtgcc 241 gtggcccgtg agaaggaggt ctgggtgcgg aaactccagg ccaggtgggt ccgggggagg 301 ccggtcgcgc ccaggaaatg ccctatacgc gcaggccgga ccatgggaac cccaaagcca 361 cggatcctgc cctggctggt gtcgcagctg gacctggggc aactggaggg cgtggcctgg 421 gtgaacaaga gccgcacgcg cttccgcatc ccttggaagc acggcctacg gcaggatgca 481 cagcaggagg atttcggaat cttccaggcc tgggccgagg ccactggtgc atatgttccc 541 gggagggata agccagacct gccaacctgg aagaggaatt tccgctctgc cctcaaccgc 601 aaagaagggt tgcgtttagc agaggaccgg agcaaggacc ctcacgaccc acataaaatc 661 tacgagtttg tgaactcagg agttggggac ttttcccagc cagacacctc tccggacacc 721 aatggtggag gcagtacttc tgatacccag gaagacattc tggatgagtt actgggtaac 781 atggtgttgg ccccactccc agatccggga cccccaagcc tggctgtagc ccctgagccc 841 tgccctcagc ccctgcggag ccccagcttg gacaatccca ctcccttccc aaacctgggg 901 ccctctgaga acccactgaa gcggctgttg gtgccggggg aagagtggga gttcgaggtg 961 acagccttct accggggccg ccaagtcttc cagcagacca tctcctgccc ggagggcctg 1021 cggctggtgg ggtccgaagt gggagacagg acgctgcctg gatggccagt cacactgcca 1081 gaccctggca tgtccctgac agacagggga gtgatgagct acgtgaggca tgtgctgagc 1141 tgcctgggtg ggggactggc tctctggcgg gccgggcagt ggctctgggc ccagcggctg 1201 gggcactgcc acacatactg ggcagtgagc gaggagctgc tccccaacag cgggcatggg 1261 cctgatggcg aggtccccaa ggacaaggaa ggaggcgtgt ttgacctggg gcccttcatt 1321 gtagatctga ttaccttcac ggaaggaagc ggacgctcac cacgctatgc cctctggttc 1381 tgtgtggggg agtcatggcc ccaggaccag ccgtggacca agaggctcgt gatggtcaag 1441 gttgtgccca cgtgcctcag ggccttggta gaaatggccc gggtaggggg tgcctcctcc 1501 ctggagaata ctgtggacct gcacatttcc aacagccacc cactctccct cacctccgac 1561 cagtacaagg cctacctgca ggacttggtg gagggcatgg atttccaggg ccctggggag 1621 agctgagccc tcgctcctca tggtgtgcct ccaacccccc tgttccccac cacctcaacc 1681 aataaactgg ttcctgctat gaaaaaaaaa aaaaaa //