LOCUS BC071607 4009 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5262278, containing frame-shift
errors.
ACCESSION BC071607
VERSION BC071607.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4009)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4009)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: j Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32171240
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4009
/db_xref="H-InvDB:HIT000264436"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5262278"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1156 a 905 c 884 g 1064 t
ORIGIN
1 gtaatccttc agctctggtg gtaagggaga tgcagtgagc tcccggctgg gagagagggt
61 tattttgcaa aactcccctg gtaccgtgcc cgcggaatat tgcaggaggt ctgtgaggta
121 ttaaaaagtg tcagcaaact gcattgaata acagacatcc taagagggga tattttccac
181 ctctataatg aagaaaagca ggagtgtgat gacggtgatg gctgatgata atgttaaaga
241 ttattttgaa tgtagcttga gtaaatccta cagttcttcc agtaacacac ttgggatcga
301 cctctggaga gggagaaggt gttgctcagg aaacttacag ttaccaccac tgtctcaaag
361 acagagtgaa agggcaagga ctcctgaggg agatggtatt tccaggccga ccacactgcc
421 tttgacaacg cttccaagca ttgctattac aactgtaagc caggagtgct ttgatgtgga
481 aaatggccct tccccaggtc ggagtccact ggatccccag gccagctctt ccgctgggct
541 ggtacttcac gccacctttc ctgggcacag ccagcgcaga gagtcatttc tctacagatc
601 agacagcgac tatgacttgt caccaaaggc gatgtcgaga aactcttctc ttccaagcga
661 gcaacacggc gatgacttga ttgtaactcc ttttgcccag gtccttgcca gcttgcgaag
721 tgtgagaaac aacttcacta tactgacaaa ccttcatggt acatctaaca agaggtccca
781 agctgctagt cagcctcctg tctccagagt caacccacaa gaagaatctt atcaaaaatt
841 agcaatggaa acgctggagg aattagactg gtgtttagac cagctagaga ccatacagac
901 ctaccggtct gtcagtgaga tggcttctaa caagttcaaa agaatgctga accgggagct
961 gacacacctc tcagagatga gccgatcagg gaaccaggtg tctgaataca tttcaaatac
1021 tttcttagac aagcagaatg atgtggagat cccatctcct acccagaaag acagggagaa
1081 aaagaaaaag cagcagctca tgacccagat aagtggagtg aagaaattaa tgcatagttc
1141 aagcctaaac aatacaagca tctcacgctt tggagtcaac actgaaaatg aagatcacct
1201 ggccaaggag ctggaagacc tgaacaaatg gggtcttaac atctttaatg tggctggata
1261 ttctcacaat agacccctaa catgcatcat gtatgctata ttccaggaaa gagacctcct
1321 aaagacattc agaatctcat ctgacacatt tataacctac atgatgactt tagaagacca
1381 ttaccattct gacgtggcat atcacaacag cctgcacgct gctgatgtag cccagtcgac
1441 ccatgttctc ctttctacac cagcattaga cgctgtcttc acagatttgg agatcctggc
1501 tgccattttt gcagctgcca tccatgacgt tgatcatcct ggagtctcca atcagtttct
1561 catcaacaca aattcagaac ttgctttgat gtataatgat gaatctgtgt tggaaaatca
1621 tcaccttgct gtgggtttca aactgctgca agaagaacac tgtgacatct tcatgaatct
1681 caccaagaag cagcgtcaga cactcaggaa gatggttatt gacatggtgt tagcaactga
1741 tatgtctaaa catatgagcc tgctggcaga cctgaagaca atggtagaaa cgaagaaagt
1801 tacaagttca ggcgttcttc tcctagacaa ctataccgat cgcattcagg tccttcgcaa
1861 catggtacac tgtgcagacc tgagcaaccc caccaagtcc ttggaattgt atggcaatgg
1921 acagaccgca tcatggagga atttttccag cagggagaca aagagcggga gaggggaatg
1981 gaaattagcc caatgtgtga taaacacaca gcttctgtga aaaatcccag gttggtttca
2041 tcgactacat tgtccatcca ttgtgggaga catgggcaga tttggtacag cctgatgctc
2101 aggacattct cgatacctta gaagataaca ggaactggta tcagagcatg atacctcaaa
2161 gtccctcacc accactggac gagcagaaca gggactgcca gggtctgatg gagaagtttc
2221 agtttgaact gactctcgat gaggaagatt ctgaaggacc tgagaaggag ggagagggac
2281 acagctattt cagcagcaca aagacgcttt gtgtgattga tccagaaaac agagattccc
2341 tgggagagac tgacatagac attgcaacag aagacaagtc ccccgtggat acataatccc
2401 cctctccctg tggagatgaa cattctatcc ttgatgagca tgccagctat gtggtagggc
2461 cagcccacca tgggggccaa gacctgcaca ggacaagggc cacctggcct ttcagttact
2521 tgagtttgga gtcagaaagc aagaccagga agcaaatagc agctcaggaa atcccacggt
2581 tgacttgcct tgatggcaag cttggtggag agggctgaag ctgttgctgg gggccgattc
2641 tgatcaagac acatggcttg aaaatggaag acacaaaact gagagatcat tctgcactaa
2701 gtttcgggaa cttatccccg acagtgactg aactcactga ctaataactt catttatgaa
2761 tcttctcact tgtccctttg tctgccaacc tgtgtgcctt ttttgtaaaa cattttcatg
2821 tctttaaaat gcctgttgaa tacctggagt ttagtatcaa cttctacaca gataagcttt
2881 caaagttgac aaactttttt gactctttct ggaaaaggga aagaaaatag tcttccttct
2941 ttcttgggca atatccttca ctttactaca gttacttttg caaacagaca gaaaggatac
3001 acttctaacc acattttact tccttcccct gttgtccagt ccaactccac agtcactctt
3061 aaaacttctc tctgtttgcc tgcctccaac agtactttta actttttgct gtaaacagaa
3121 taaaattgaa caaattaggg ggtagaaagg agcagtggtg tcgttcaccg tgagagtctg
3181 catagaactc agcagtgtgc cctgctgtgt cttggaccct gccccccaca ggagttgtac
3241 agtccctggc cctgttccct acctcctctc ttcaccccgt taggctgttt tcaatgtaat
3301 gctgccgtcc ttctcttgca ctgccttctg cgctaacacc tccattcctg tttataaccg
3361 tgtatttatt acttaatgta tataatgtaa tgttttgtaa gttattaatt tatatatcta
3421 acattgcctg ccaatggtgg tgttaaattt gtgtagaaaa ctctgcctaa gagttacgac
3481 tttttcttgt aatgttttgt attgtgtatt atataaccca aacgtcactt agtagagaca
3541 tatggccccc ttggcagaga ggacagaggt gggcttttgt tcaaagggtc tgccctttcc
3601 ctgcctgagt tgctacttct gcacaacccc tttatgaacc agttttggaa acaatattct
3661 cacattagat actaaatggt ttatactgag cttttacttt tgtatagctt gataggggca
3721 gggggcaatg ggatgtagtt tttacccagg ttctatccaa atctatgtgg gcatgagttg
3781 ggttataact ggatcctact atcattgtgg ctttggttca aaaggaaaca ctacatttgc
3841 tcacagatga ttcttctgaa tgctcccgaa ctactgactt tgaagaggta gcctcctgcc
3901 tgccattaag caggaatgtc atgttccagt tcattacaaa agaaaacaat aaaacaatgt
3961 gaatttttat aataaaatgt gaactgatgt agcaaaaaaa aaaaaaaaa
//