LOCUS BC071597 4865 bp mRNA linear HUM 12-JUN-2008
DEFINITION Homo sapiens transmembrane protein 194A, mRNA (cDNA clone
IMAGE:30344897), partial cds.
ACCESSION BC071597
VERSION BC071597.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4865)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4865)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: n Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58037092.
FEATURES Location/Qualifiers
source 1..4865
/db_xref="H-InvDB:HIT000264426"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30344897"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..4865
/gene="TMEM194A"
/db_xref="GeneID:23306"
/db_xref="HGNC:HGNC:29001"
CDS <1..1353
/gene="TMEM194A"
/codon_start=1
/product="TMEM194A protein"
/protein_id="AAH71597.1"
/db_xref="GeneID:23306"
/db_xref="HGNC:HGNC:29001"
/translation="RWLEATMAGGMKVAVSPAVGPGPWGSGVGGGGTVRLLLILSGCL
VYGTAETDVNVVMLQESQVCEKRASQQFCYTNVLIPKWHDIWTRIQIRVNSSRLVRVT
QVENEEKLKELEQFSIWNFFSSFLKEKLNDTYVNVGLYSTKTCLKVEIIEKDTKYSVI
VIRRFDPKLFLVFLLGLMLFFCGDLLSRSQIFYYSTGMTVGIVASLLIIIFILSKFMP
KKSPIYVILVGGWSFSLYLIQLVFKNLQEIWRCYWQYLLSYVLTVGFMSFAVCYKYGP
LENERSINLLTWTLQLMGLCFMYSGIQIPHIALAIIIIALCTKNLEHPIQWLYITCRK
VCKGAEKPVPPRLLTEEEYRIQGEVETRKALEELREFCNSPDCSAWKTVSRIQSPKRF
ADFVEGSSHLTPNEVSVHEQEYGLGSIIAQDEIYEEASSEEEDSYSRCPAITQNNFLT
"
BASE COUNT 1309 a 1009 c 1022 g 1525 t
ORIGIN
1 agatggcttg aggcaaccat ggcgggagga atgaaagtgg cggtctcgcc ggcagttggt
61 cccgggccct ggggctcggg agtcgggggc ggtgggacag tgcggctact cttgatcctc
121 tccggctgct tggtctacgg cacagctgaa actgatgtaa atgtggtcat gcttcaggaa
181 tcccaagttt gtgaaaagcg tgccagccaa caattctgtt acacaaatgt gcttatccca
241 aaatggcatg atatatggac acggatacag atccgagtaa atagttccag attggttcga
301 gtcacccagg tggagaatga ggagaaactg aaggagctag agcagtttag tatctggaac
361 tttttttcct cctttttaaa agagaaattg aatgacacct atgttaacgt gggtctatac
421 agcacaaaaa cctgcctcaa agttgagatt atagagaagg acaccaagta cagtgtcatt
481 gtgatccgga gatttgatcc caaactcttt cttgttttcc ttcttggact tatgctattt
541 ttttgtggag acttgctgag cagaagtcaa attttctact actctactgg gatgactgtg
601 ggaattgtgg cctctctgct aatcatcatt tttatactat ctaagtttat gcctaagaaa
661 agtcccattt acgtcatcct ggtgggaggc tggtcttttt ctctgtacct cattcaacta
721 gtttttaaaa atttacaaga gatctggagg tgttactggc agtatctttt aagttatgtc
781 ctcacagttg gattcatgag ttttgcagta tgttacaagt atgggccctt ggagaatgaa
841 cgaagtatca acctgctgac ctggaccttg cagctgatgg gcctgtgttt catgtattct
901 ggcatccaga taccacatat tgcccttgcc attatcatca ttgctctttg tactaagaac
961 ctggaacacc ctattcagtg gctgtacatc acctgcagaa aggtgtgtaa gggagcagaa
1021 aagcctgttc cccctcgtct cctgacagaa gaagaatatc ggatacaagg agaggtagaa
1081 acccgaaagg ctttagagga gctccgagaa ttttgtaaca gtccagactg ctctgcttgg
1141 aagactgttt ctcgaatcca gtctccaaaa agatttgctg actttgtgga aggctcttcc
1201 cacctcacgc caaatgaagt ttctgtccat gagcaggagt atggattagg gagcattatt
1261 gcccaggatg aaatctatga ggaagcatcc tctgaggagg aggactcata ttctcggtgt
1321 cctgctatca cacagaacaa ctttctaacc taggtagtgg tcagttatct ttacgtggac
1381 tggcttggtg ccttggtcca tgttgcatgt gttgtgcaat tgctttcaac cctttgaaac
1441 agagtgagat agatagggta gaaattctcc tactgaaata agaggcctaa aaaggcctcc
1501 ctttggaaat gggaggtctc tatgggatcc ctgaggaagg agagtggata aagtagtgaa
1561 tgctgggtag ttcacttccc attggttaag ctaacagccc acttttatgt ttccagagaa
1621 attggatggc cacagctagc atggcattct agctccttct tgaaagttga ttcaatcatg
1681 gcatttctgt cactggctgg ctctccaaag taagaactgt tgttaagtgc aggaatgctt
1741 ttagactata ggctgcaact tccagagaga aatccacaaa tctgagcctc cttcactcca
1801 gcttttattt cagtgacttt agaataatta ttgatttaac tgttttggga ggaaaataga
1861 tttttattgt tttgtttttt aaatgaatgt cttttaaaaa acataacaaa ctcatgttcc
1921 agaaccagca agtgctccag agtgacacac cccctaggcc cctacatatt tattaatatg
1981 gattatccat taaagcccca ggagctgttg ttttaagctt tgatttagtt ctcatacata
2041 tgatagaaag tcctatttgc ctttaggaac atgcctgtag gctcttctgc aggtgagatg
2101 tactgggctt tttattatat tcaactttca attccatctt aaaaaacatt tgtattcttc
2161 tcttcccatt cttccttacc ctgcctttgc cctttcagga agggtcagtt cccttacctg
2221 tgaactatgt atgttcagag tagcattatt cctgctagct aggagaagtc atcttgttta
2281 ggggatttgg atgcttttta tacgttctcc attttcctgt cattgggtca tgttatcttt
2341 gagttgctat gaaatcagga aactgtctcc ttttcctttc ccttcctttg tctacatgct
2401 ctgtccattc ctttcagcct tttctcacca cccatactcc cccaaatctg ggtaattttt
2461 aagccttgaa actatgtagt ttcttgatac acaatttgta gttatgcagc agccacaatt
2521 tgcattgcca ggaaataggc tccaggttat cttcatgcct ctgggtgctc attcagctgt
2581 caagtttcca tgaacttaca cttatttatg attgcgtttc tgacctgagg tgtatgctgc
2641 ctgttattgc agtagcatta gtttcagatt cttttgccat tgcaaagtac cccttataaa
2701 ccagcaatgt catctgtgag gaagcaaatt ctcaagtgtc tgtcatttac ttggttcttt
2761 ttctttgtgg tcttcaccct tataccctgg aaaagtctgt aattacctta gccaggaaga
2821 tagatggtca tggcaagcgc acagcaccag acttactggc tcaccaagat gatggaaaaa
2881 ggcagatgat tttttaaaaa gccgtaatga ctcctttaga ccagccattt agcgtggtaa
2941 ttttgaaagg cctagctcca ttgcagactt ccaaagggtc agctctgaga ctgccctcca
3001 ggtgggcagt tgattatttc ctccagtgtt ttccagagcc ttaaactgtc ctaagtgaca
3061 actacctcag ttggcaggaa agagacatat agtagaaagt gaaaaatgag cagtatttgg
3121 gcagatgcta tgggttacag ttgaagggta aaaggaactt tacattggga aacctttata
3181 cccttgtgaa ttatgtacat ggtaaaatgt tctctctcta caaagaacta ttaaaacttc
3241 tgaaatatac tattttttac cttatttata gaaattgaga cctagcatat ttaagcataa
3301 gtttatttta aaaaataatt caactcgtgc aagtggtctc aggattctct ggagattttg
3361 gtgcctcccc tacttaggga ggtgatagct tgcctataag ggtgactttt cctgatcatg
3421 tctttatttc aatgagaaag cactttgaaa ttgtgaaaga ttctcctctt tctctgttta
3481 ataaaccccc atgaaatata gtttccatct ctagaccagt tttttttcca ccgtgtttag
3541 acttgaggtg aataaaatca aactgttttt tactccctat ctggtagttg gagacctgag
3601 ctgcaggcag tggagatggc aattggttct gcagcctgag agttgctctc acacagtgaa
3661 ggacggtgct gctctggtgt gctgtgtgtc cttgccctgc ctgcctgtgg ctctgcccag
3721 atgcttcaga tcctctgtgt tccggagatt gcttgacttc aaccttcttt aggagctgct
3781 cttgtctccc tcttggccac ttagtttgct ggctcagtca ctacttgaag accccattta
3841 atttttctct ggcagttata gctcttgtga tttcagtaca gtctcatctc tcagaccaat
3901 ctcatcaaga aggattgaag ggataactat gaggtaagct ggacattgga gccgtgtttg
3961 ctgccacgtc agcgtcttgc tgggtgaatg tcaagccata aatgggctcc agggctctgg
4021 atctcatcag cattggaaat ctattgcctc tcatcagtct gaccaaatta tgtagagcat
4081 taatgtagag actcccatta atgggaatac aagaggcagc tggcataaaa catttctttc
4141 actttccttt cccactcaga ttgcttcaag agaccaacag aacacaggga tcaaaaacaa
4201 ggaaaattta gcaacttcat taccttctaa taagtaattc ctgttagcca ctgcatccca
4261 ccaaaactag tttatttttc ccctcaaatt catgattttt acgtctgtta caaagggaat
4321 tttgctgata gctctttggg tcccactgtt ccattttatg ctaatagatt ccattctagg
4381 gcccagccgt ctcttgactg atggtgttcc ctttaaccct tggcatgtat aatagaattt
4441 tggtgaatga aagaacccaa ataggccaga tagtcccccc aggccctgat atccataaaa
4501 ggcttgggaa tgcattatgt aattgtcctt agtctttttg ttgttttaga aaaaaaaaac
4561 aagatgggct cagatggatg cctacgtaaa aatggttcct agctgtgtac tcataacttt
4621 tctttgaatt gagtagtgaa aggaaggagg aggaaaggaa attaaatgtc cttctagtat
4681 tctctggact caagtctgac atatgagata ataacctata ttgaaatgcc aagaattgta
4741 tctgaaacaa gagaacagtt tgacacattt atcatgcctt catattacat attaactgaa
4801 accaattaat aaacatatga aatatccatt gcacaaggca aaggcaccca aaaaaaaaaa
4861 aaaaa
//