LOCUS BC071592 4932 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived), mRNA (cDNA clone MGC:87400 IMAGE:30342239), complete cds. ACCESSION BC071592 VERSION BC071592.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4932) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4932) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 168 Row: l Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48928036. FEATURES Location/Qualifiers source 1..4932 /db_xref="H-InvDB:HIT000264421" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87400 IMAGE:30342239" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4932 /gene="FARP1" /gene_synonym="CDEP" /gene_synonym="MGC87400" /gene_synonym="PLEKHC2" /db_xref="GeneID:10160" /db_xref="MIM:602654" CDS 240..3470 /gene="FARP1" /gene_synonym="CDEP" /gene_synonym="MGC87400" /gene_synonym="PLEKHC2" /codon_start=1 /product="FARP1 protein" /protein_id="AAH71592.1" /db_xref="GeneID:10160" /db_xref="MIM:602654" /translation="MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKI QMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLVEGDYFGLEFPDHKKITVWLDLLKPIV KQIRRPKHVVVKFVVKFFPPDHTQLQEELTRYLFALQVKQDLAQGRLTCNDTSAALLI SHIVQSEIGDFDEALDREHLAKNKYIPQQDALEDKIVEFHHNHIGQTPAESDFQLLEI ARRLEMYGIRLHPAKDREGTKINLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRF LIKLRPDANSAYQDTLEFLMASRDFCKSFWKICVEHHAFFRLFEEPKPKPKPVLFSRG SSFRFSGRTQKQVLDYVKEGGHKKVQFERKHSKIHSIRSLASQPTELNSEVLEQSQQS TSLTFGEGAESPGGQSCRRGKEPKVSAGEPGSHPSPAPRRSPAGNKQADGAASAPTEE EEEVVKDRTQQSKPQPPQPSTGSLTGSPHLSELSVNSQGGVAPANVTLSPNLSPDTKQ ASPLISPLLNDQACPRTDDEDEGRRKRFPTDKAYFIAKEVSTTERTYLKDLEVITSWF QSTVSKEDAMPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEGRSNAQIRDYQRIG DVMLKNIQGMKHLAAHLWKYSEALEALENGIKSSRRLENFCRDFELQKVCYLPLNTFL LRPLHRLMHYKQVLERLCKHHPPSHADFRDCRAALAEITEMVAQLHGTMIKMENFQKL HELKKDLIGIDNLVVPGRPGSFSLMRTPHLGQARRIPCAPERRPLLLVKEFIRLGSLS KLSGKGLQQRMFFLFNDVLLYTSRGLTASNQFKVHGQLPLYGMTIEESEDEWGVPHCL TLRGQRQSIIVAASSRSEMEKWVEDIQMAIDLAEKSSSPAPEFLASSPPDNKSPDEAT AADQESEDDLSASRTSLERQAPHRGNTMVHVCWHRNTSVSMVDFSIAVENQLSGNLLR KFKNSNGWQKLWVVFTNFCLFFYKSHQDNHPLASLPLLGYSLTIPSESENIQKDYVFK LHFKSHVYYFRAESEYTFERWMEVIRSATSSASRPHVLSHKESLVY" BASE COUNT 1222 a 1349 c 1262 g 1099 t ORIGIN 1 aagtcccgcg cagcccgggg tggtgccgga agcccgtgcc tgtggctccg ggggagggta 61 gggctcggtg ggtccctgaa gactgtcctc cccgcgcgac gtcgcaggcg aagcagcccc 121 aggcaggacc tcaaaaagcg acctgcagag tccgagcccc tgaccgcccg cctgccgctc 181 ccggcttcgc cgtgcacacg tctcccgctc tccccgatat tctctaagcc gctttcatca 241 tgggagaaat agagcagagg ccgaccccag gatcacgact gggggccccg gaaaattcgg 301 ggatcagtac cttggaacgt ggacagaagc cgcccccaac accttcagga aaactcgtgt 361 ccatcaaaat ccagatgctg gatgacaccc aggaggcatt tgaagttcca caaagagctc 421 ctgggaaggt gctgctggat gcagtttgca accacctcaa cctcgtggaa ggtgactatt 481 ttggcctcga gtttcctgat cacaaaaaga tcacggtgtg gctggatctc ctaaaaccca 541 ttgtgaaaca gattagaagg ccaaagcacg ttgttgttaa gtttgtggtg aaattctttc 601 cgcctgacca cacacaactc caagaagaac tcacaaggta cctgttcgcg ctgcaggtga 661 agcaggactt ggctcaaggc aggttgacgt gtaatgacac cagcgcagct ctcttgattt 721 cacacattgt gcaatctgag attggggatt ttgatgaagc cttggacaga gagcacttag 781 caaaaaataa atacatacct cagcaagacg cactagagga caaaatcgtg gaatttcacc 841 ataaccacat tggacaaaca ccagcagaat cagatttcca gctcctagag attgcccgtc 901 ggctagagat gtatggaatc cggttgcacc cggccaagga cagggaaggc acgaagatca 961 atctggccgt tgccaacacg ggaattctag tgtttcaggg tttcactaag atcaatgcct 1021 tcaactgggc caaggtgcgg aagctgagct tcaagaggaa gcgctttctc atcaagctcc 1081 ggccagatgc caatagtgcg taccaggata ccttggaatt cctgatggcc agtcgggatt 1141 tctgcaagtc cttctggaaa atctgtgttg aacatcatgc cttctttaga ctttttgaag 1201 agcccaaacc aaagcccaag cccgtcctct ttagccgggg gtcatcattt cggttcagtg 1261 gtcggactca gaagcaggtt ctcgactatg ttaaagaagg aggacataag aaggtgcagt 1321 ttgaaaggaa gcacagcaag attcattcta tccggagcct tgcttcacag cctacagaac 1381 tgaattcgga agtgctggag cagtctcagc agagcaccag ccttacattt ggagaaggtg 1441 ccgaatctcc agggggccag agctgccggc gaggaaagga accgaaggtt tccgccgggg 1501 agccggggtc gcacccgagc cctgcgccga ggagaagccc cgcgggtaac aagcaggcgg 1561 acggagccgc ctcggcgccc acggaggaag aggaggaggt cgttaaggat aggacccagc 1621 agagtaaacc tcagcccccg cagccaagca caggctccct gactggcagt cctcaccttt 1681 ccgagctgtc tgtgaactcg caggggggag tggcccctgc caacgtgacc ttgtctccca 1741 acctgagccc cgacaccaag caggcctctc ccttgatcag cccgctgctg aatgaccagg 1801 cctgcccccg gacggacgat gaggatgagg gccggaggaa gagattccca actgataaag 1861 cgtacttcat agctaaggaa gtgtctacca ccgagcgaac atatctgaag gatctcgaag 1921 ttatcacttc gtggtttcag agcacagtga gcaaagagga cgccatgccg gaagcactga 1981 aaagtctcat attcccgaat tttgaacctt tgcacaaatt tcatactaat tttctcaagg 2041 aaattgagca acgacttgcc ctgtgggaag gccgctcaaa tgcccaaatc agagattacc 2101 aaagaatcgg cgatgtcatg ctgaagaaca ttcagggcat gaagcacctg gcggctcacc 2161 tgtggaagta cagcgaggcc ttggaggccc tggagaatgg aatcaagagc tcccggcggc 2221 tggagaactt ctgcagagac tttgagctgc agaaggtgtg ttacctaccg ctcaacacct 2281 tcctcctgcg gccactgcac cggctcatgc actacaagca ggtcctggag cggctgtgca 2341 aacaccaccc gccgagccac gccgacttca gggactgccg agccgctttg gcagagatca 2401 cggagatggt ggcacagctc cacggtacga tgatcaagat ggagaatttc cagaagctgc 2461 acgaactcaa gaaagatttg attggcattg acaatcttgt ggttccggga aggcctggct 2521 ccttttccct tatgaggact ccacacttag gacaagccag gcgcatccca tgtgctccag 2581 agaggaggcc attgttatta gtaaaggagt tcatccgtct gggcagcctc agcaagctct 2641 cggggaaggg gctccagcag cgcatgttct tcctgttcaa cgacgtcctg ctatacacga 2701 gccgggggct gacggcctcc aatcagttta aagtccacgg gcagctcccg ctctatggca 2761 tgacgattga ggagagcgaa gacgagtggg gggtgcccca ctgcctgacc ctccggggcc 2821 agcggcagtc catcatcgtg gccgccagtt ctcggtccga gatggagaag tgggttgagg 2881 acatccagat ggccattgac ctggcggaga agagcagcag ccccgcccct gagttcctgg 2941 ccagcagccc ccctgacaac aagtcccctg atgaagccac cgcggctgac caggagtcag 3001 aggatgacct gagcgcctcg cgcacatcgc tggagcgcca ggccccgcac cgcggcaaca 3061 caatggtgca cgtgtgctgg caccgcaaca ccagcgtctc catggtggac ttcagcatcg 3121 cagtggagaa tcagttgtct ggaaacctgc tgaggaaatt caaaaacagc aacgggtggc 3181 agaagctgtg ggtggtgttc acaaacttct gcctgttctt ctacaaatca caccaggaca 3241 atcatcccct tgccagcctg cctctgctcg gctactcgct caccatcccc tctgagtccg 3301 agaacatcca gaaagactac gtgttcaagc tgcacttcaa gtcccacgtc tactacttca 3361 gggcggaaag cgagtacacg ttcgaaaggt ggatggaagt gatccgcagt gccaccagct 3421 ctgcctcgcg accccacgtg ttgagtcaca aagagtctct tgtgtattga tggccggaca 3481 cactcgtttc cgcagtggct gctttcctgg aagacgtttc ctttcttctg tattaatgaa 3541 gcctggtaaa attaacacct gtctgaaaat caaaaacatg gcttcccagc agctctcctg 3601 tctccacagc cgcgtttttt aaccccgacc tctcagcgtc tgaatgaaca gcgctcccac 3661 ctccagtcct ggcatccgct gggggcgctg ttctttagct agtgccagta ttaaaacatt 3721 gtcattacga gagtgccaaa tgacatcttc cctccaccct gcccctgaaa aacagtacac 3781 acacatccgt tcaacacaag acagggcaag tgtttttctt cctaaaaaaa gttctttctt 3841 ttattatttt cacctattgg ctgctgcatt ttacgaagtg gacttcccgg tgtttgtttg 3901 tttgtttgca atacacttag tgcagcctta agcaaatgag atcattttca gatttcattt 3961 ttttttttca gtctttctac ttttgtaata ataggaagtt agtaggactc acttctctga 4021 ttaataagca atttgcagca cacagcgttc cactgcgggg tttcacgctc acctgaaaac 4081 acctgttccc aacctacttc ttggtgcaag ttgaccaaat cgttttaagt ggtaactctt 4141 tccaaccgta gcagggttgt tttctgttaa gcaaagccga gatccagtgc aatacctgga 4201 ctgtcaccgt cctgtgagtg gtgtacacaa tgggaagata ataagccgtg gtgttttgct 4261 gtctgtctgt gtcacaagca tgaaaacccg tgtgtcattg atcagcacca tttgtggtat 4321 gttccctgat gagcgtttag tgagcctgct ggctgcagag cactatgaaa tcatggtacg 4381 tagtccccgg cacctgtcgt tattcctata tcctcctgca actgtggttt gaaactgcgc 4441 attctctagt agtatatatc gtgcctgtct tcaaaaacat ttaccttttt atactcattc 4501 tccccaggca tggggtagtg tcagtcggac tgcacaggga acacggtttc cagtggcttt 4561 ggcccctact cgggaaacgt ctgcctgttc tcgatggtga tggggtggct gccattccct 4621 tggttttcct aagccctttc taacgagagt ctcaaacaag cggaggcgag ggccaattca 4681 accccattct ttccagcgcc ccgcaccata gcacctgccc acctgagaac caggaacgca 4741 ccctctctgt ggagctctga ctggtgtacc tggaaacaaa cagcaacttg caaacggacg 4801 aagagcctgc cgtgtgttaa tcatttgcct tacaagatgt accagacggt ttccagtact 4861 aacaaaggga ataaaaatac ctcacgccac aatccagcat attgatgttt taaggcaaaa 4921 aaaaaaaaaa aa //