LOCUS BC071578 4311 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5258923, containing frame-shift
errors.
ACCESSION BC071578
VERSION BC071578.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4311)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4311)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15451928
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4311
/db_xref="H-InvDB:HIT000264407"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5258923"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1350 a 852 c 880 g 1229 t
ORIGIN
1 agggtccgga gcagctgctg ccagcccgcg ggcactgaag tcctcccggc tgccgctcga
61 gtagccacgg gcgcgatcgg gaccagaagt ctcctcctcc atgatcactt tggaagccgg
121 gggaagactt tgccctgccc tgagagctgg tctgcgtttc ccaggcgcgg cggcggcgga
181 gcagcagctg cagcagccga gtccaaatag gagcggccac agccaggggc gtgtgcgccc
241 cgcgcggagc gagctcgggt tcccctcgga atgtccccgg ggcgcccggc gcgctgaccc
301 cgaagccgcc tccgccttcg gcgcctgctg cctccctcgg ccaggcttgt tgttcgggac
361 tgtgagcttc ctggctcctg ggcagtgggg aagcccccgg gggcgagtga cctcagctgg
421 ccacgaccca gccctccccc gtgcgtatct cgcttaagat ggcagcggag tcaggggaac
481 taatcggggc ttgtgagttc atgaaagatc ggttatattt tgctacttta aggaatagac
541 caaaaagcac agtaaatacc cactatttct ccatcgatga ggagctggtc tatgaaaatt
601 tctatgcaga ttttggaccg ctgaacttgg caatggtgta cagatattgc tgcaaactaa
661 acaagaaact aaaatcatac agtttgtcaa gaaagaaaat agtgcactac acctgttttg
721 accaacggaa aagagcaaat gcagcatttt tgataggtgc caatgcagta atctatttaa
781 agaagacacc agaagaagcc tacagagcac tcctgtctgg ctcaaacccc ccctatcttc
841 cattcaggga tgcttccttt ggaaattgca cttacaatct caccattctc gactgtttgc
901 agggaatcag aaagggatta caacatggat tttttgactt tgagacattt gatgtggatg
961 aatatgaaca ttatgagcga gttgaaaatg gtgacttcaa ctggattgtt ccaggaaaat
1021 ttttagcatt tagtggacca catcctaaaa ggcaaaattg agaatggtta tcatcttcac
1081 gcccctgaag cctactttcc ttatttcaaa aagcataatg tgactgcagt tgtgaggcta
1141 aacaaaaaga tttatgaggc aaagcgcttc acagacgctg gcttcgagca ctatgacctc
1201 ttcttcatag atggcagcac acccagtgac aacatcgtgc ggaggttcct gaacatctgt
1261 gagaacaccg aaggggccat cgccgttcac tgcaaagctg gtcttggaag aacagggaca
1321 ttgatagcct gttatgtaat gaaacactac aggtttacac atgctgaaat aattgcttgg
1381 attagaatat gccggccagg ctctattata ggaccccagc agcacttcct ggaagaaaaa
1441 caagcatcgt tgtgggtcca aggagacatt ttccgatcca aactgaaaaa tcgaccatcc
1501 agtgaaggaa gtattaataa aattctttct ggcctagatg atatgtctat tggtggaaat
1561 ctttcaaaaa cacaaaacat ggaacgattt ggagaggata acttagaaga tgatgatgtg
1621 gaaatgaaaa atggtataac ccagggagac aaactacgtg ccttaaaaag tcagagacag
1681 ccacgtacct caccatcctg tgcatttagg tcagatgata caaaaggaca tccaagagca
1741 gtgtcccagc ctttcagatt aagttcatcc ctgcaaggat ctgcagttac tttgaagaca
1801 tcaaaaatgg cactgtcccc ttcagcaacg gccaagagga tcaacagaac ttctttgtct
1861 tcgggtgcca ctgtaagaag cttttccata aactcccggc tagccagttc tctagggaac
1921 ttgaatgctg caacagatga tccagagaac aaaaagacct actcatcctc taaggcaggc
1981 ttcacagcca gcccgtttac caacctcttg aatggcagct cccagccgac taccagaaat
2041 taccctgagc tcaacaataa tcagtacaac agaagcagca acagcaacgg gggcaacctg
2101 aacagccccc caggccccca cagcgccaag acagaggagc acaccaccat cctccgaccc
2161 tcctacaccg ggctttcttc ttcttcagcg agattcctga gccgttctat cccttccctt
2221 cagtctgaat atgttcatta ctaaggcctt gccactccag tgaaagctgt tcttctctta
2281 gacacaattt cttcatctgg acgagcagtg gagagggaaa gcaacttctt gctggaagaa
2341 tatctctgcc ttcttacctt aaattaaaaa gagcactaag ataacacctt caagagactt
2401 gaaaacagaa aactggttaa tgactactat aaatgcactg aaactatgtt tatggagatt
2461 tccatacttt aaagacagtt ttaatgttga atttggtact ttgaagggtt atttttaatg
2521 tattttggta atacatttat tattatattt acatgtacag tgttacatta tatatgtatt
2581 gtgaacttta aaagactatt ttgataaatt tataaatata taaaattatg taaaaactac
2641 actatatttt gatttagatt ttcctgctgt ttgctaccaa aaatttgtat tttaaatctg
2701 tttagtttta gtatggtttt gtctctaatg aataaataat tccttcttat taagaagaag
2761 taagggagaa agtttttaga aagtgatttt tatgctcgca ctataaatat ggcaggtcag
2821 ttcattcttt tgggaagtca gtttagttac actgagttta tccaagttta tctctaccaa
2881 gagtataatg gcatgggatg gcttatttag gacaattccc tttcccattg tttttgttgc
2941 tgagccaatt tgagttagtt ttgcatcctg gggggcttta aaatacagca tgcagtgaaa
3001 gatcagaatt cactgaatat ttcttctgag agcatggttt catggttttt ctctatgaaa
3061 tgactcaata ttccaaatgt ttttttttcc ttcctccttt caaaagagtt cttaacccaa
3121 ttaggatatc ctgctttggg tatgaggttg ttgttgcctg taatcacaca tggtttgaca
3181 tcagttttaa atcaatggag agaaaaaact gaaaaagatg ctgctaagta gttctctgta
3241 ttaaaggaga tatttttaaa acagggtaca accccctgct gcacacgcta gcatatctgg
3301 aacatactat gaaaatgaaa ggacccttat aggtactcac agccctttca tgtaagtatg
3361 atctgatatt taggtcttca gaagcctgta ggtttcattt ctatgaggaa tcgaggagcg
3421 ttacatcctg atatccttcc aggctgctta agaatggact gcttcgacac tgaaagtgct
3481 agttaaatgg attcatatga agtgctttac tcccaaccat tgagttattt ataatgtatt
3541 tattagggga gggtaccttg agtctattat atatgcttca tcaaaacatc ttgttcatgt
3601 tttatgtttt taaaaaaggc atttgaatga atgtttgact caggtttgtt aaattaacct
3661 tcagtaactg cagtaccaaa aattacactc aactgatgaa aaaaacgaat tgtatgattt
3721 aggaatcaaa aactaaaata agtggaatta tgtatctttt ctaaagttaa aaaagtaaaa
3781 tattttatta tgagttatta taaaaattgg ttaattgtat aggaagatga cagtattttt
3841 ttcaagttat cataaaaagt aattcagatg acatttgaga agtaggggaa agggaatcat
3901 gttgacagtt ttagttctgt gaacactaat ttgtgtgaag ctattaaaat gattgtaaag
3961 ttgactactg taaatttccc ataattatgt gtgtatatgt gtcatatgta tgtacatgta
4021 tatgtctaaa aattacttta cacatgtgcc tacatagaca caccaagaag tggatgtata
4081 taatatagaa agtatatagc aaagtaattt tactctgata ataaaaattg tttgacatgt
4141 attttgttat gaatagttta tcttccaaaa gatattttgc tctattttaa agtgtagaag
4201 aatacactgc taataaataa taaaagtttt attcaattta aaaaaaaaaa aaaaaaaaaa
4261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//